Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.28□□□□□ -1.56
EFCC1Q9HA90 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.28□□□□□ -1.56
EFCC1Q9HA90 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 AC006971.1-201ENST00000407916 4486 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 MFSD8-242ENST00000641690 4199 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 MIR372-201ENST00000362225 67 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 MIR383-201ENST00000362257 73 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 RNU6-989P-201ENST00000362756 107 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 SNORD46.1-201ENST00000364139 104 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 Y_RNA.276-201ENST00000364732 109 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 Y_RNA.462-201ENST00000384268 102 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 RNU6-339P-201ENST00000384310 107 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 Y_RNA.471-201ENST00000384312 102 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 SNORA11.2-201ENST00000408318 127 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 RPL21P38-201ENST00000418090 167 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 AC092423.1-201ENST00000430165 186 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 BX276092.4-201ENST00000452056 248 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 RPL7P5-201ENST00000471472 736 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 RNA5SP249-201ENST00000516127 99 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 Y_RNA.687-201ENST00000516558 91 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 RNU7-4P-201ENST00000516961 62 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 OR1M4P-201ENST00000589199 287 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 AL159153.1-201ENST00000619688 317 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 SNORD39.4-201ENST00000620099 78 ntBASIC5.27□□□□□ -1.57
EFCC1Q9HA90 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
EFCC1Q9HA90 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AC027287.1-201ENST00000553115 1453 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AC087190.4-201ENST00000574616 8334 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AL136164.3-201ENST00000624429 3978 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 Y_RNA.54-201ENST00000362766 105 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 Y_RNA.65-201ENST00000362846 100 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 RNU4-50P-201ENST00000364361 141 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 Y_RNA.270-201ENST00000364693 104 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 MIR625-201ENST00000385047 85 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AC110754.1-201ENST00000399740 601 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 BX842559.1-201ENST00000419615 532 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 RPL7P2-201ENST00000427639 268 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 RPS20P1-201ENST00000434853 354 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 LINC01399-202ENST00000458450 244 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 RN7SKP277-201ENST00000516895 283 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 HMGB2P1-201ENST00000591146 634 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 VN1R91P-201ENST00000594377 169 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 AL160281.1-201ENST00000605307 311 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 MIR3976-201ENST00000606807 139 ntBASIC5.26□□□□□ -1.57
EFCC1Q9HA90 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.26□□□□□ -1.57
EFCC1Q9HA90 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 Y_RNA.105-201ENST00000363182 111 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 RNU6-263P-201ENST00000363811 107 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 Y_RNA.478-201ENST00000384358 107 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 MIR628-201ENST00000385229 95 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 SDHCP2-201ENST00000398565 501 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 AL590704.1-201ENST00000402856 794 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 CYCSP19-201ENST00000411715 316 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.25□□□□□ -1.57
EFCC1Q9HA90 AC098869.1-201ENST00000481627 292 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 AL132838.2-201ENST00000492041 314 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 AC093852.1-201ENST00000503587 266 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 MTND3P25-201ENST00000509243 135 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 ACA59.1-201ENST00000515966 143 ntBASIC5.25□□□□□ -1.57
EFCC1Q9HA90 AC069113.1-201ENST00000517763 267 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms