Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PHOX2BQ99453 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC022336.2-201ENST00000568966 2538 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC135776.4-201ENST00000624300 1904 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PHOX2BQ99453 Y_RNA.7-201ENST00000362352 102 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 Y_RNA.23-201ENST00000362496 106 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 SNORD1C-201ENST00000363315 78 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 RNA5SP211-201ENST00000365516 117 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 RNA5SP332-201ENST00000391063 115 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 ACA64.4-201ENST00000459070 127 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC009127.1-201ENST00000467090 155 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC140059.1-201ENST00000489238 361 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 HMGB1P22-201ENST00000505315 124 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC093840.1-201ENST00000511599 336 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 AC008033.2-201ENST00000542626 177 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 MIR6830-201ENST00000636015 70 ntBASIC5.52□□□□□ -1.53
PHOX2BQ99453 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PHOX2BQ99453 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PHOX2BQ99453 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.52□□□□□ -1.53
PHOX2BQ99453 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 RNU1-108P-201ENST00000362556 161 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 Y_RNA.121-201ENST00000363309 113 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 RNA5SP455-201ENST00000365190 119 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 RNU6-140P-201ENST00000384566 108 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 AC092047.1-201ENST00000424997 240 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 AL512844.2-201ENST00000433990 593 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 GPM6BP3-201ENST00000442797 145 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 PTMAP3-201ENST00000447474 330 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 snoU13.1-201ENST00000459157 104 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 RN7SL352P-201ENST00000466002 277 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 RPL23AP14-201ENST00000468281 468 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 MIR3160-1-201ENST00000577972 85 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 MIR6780A-201ENST00000615089 68 ntBASIC5.51□□□□□ -1.53
PHOX2BQ99453 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.51□□□□□ -1.53
PHOX2BQ99453 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PHOX2BQ99453 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHOX2BQ99453 AC110491.1-201ENST00000562191 2010 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHOX2BQ99453 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHOX2BQ99453 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHOX2BQ99453 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PHOX2BQ99453 RNU6-942P-201ENST00000363002 107 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 RNU6-1141P-201ENST00000364520 107 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 RPL37P4-201ENST00000448908 268 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 RN7SKP122-201ENST00000515923 296 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 HMGB1P40-201ENST00000525121 540 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 UBL5P4-201ENST00000562584 236 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 MIR3684-201ENST00000579779 74 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 AC011447.4-201ENST00000587562 111 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 AC019159.1-201ENST00000605094 187 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 AC010999.1-201ENST00000611856 324 ntBASIC5.5□□□□□ -1.53
PHOX2BQ99453 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PHOX2BQ99453 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms