Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.19□□□□□ -1.58
CALR3Q96L12 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CALR3Q96L12 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CALR3Q96L12 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CALR3Q96L12 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CALR3Q96L12 RNU6-527P-201ENST00000363425 104 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 MIR518D-201ENST00000385014 87 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 SNORA12.2-201ENST00000391040 156 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 RPL23AP48-201ENST00000406913 488 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.19□□□□□ -1.58
CALR3Q96L12 RPS29P14-201ENST00000431518 171 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.19□□□□□ -1.58
CALR3Q96L12 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.19□□□□□ -1.58
CALR3Q96L12 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.19□□□□□ -1.58
CALR3Q96L12 RPL23AP49-201ENST00000492925 468 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.19□□□□□ -1.58
CALR3Q96L12 AC109329.1-201ENST00000518744 317 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 IGKV2D-19-201ENST00000523346 262 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 AC090517.1-201ENST00000569307 266 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 AC104581.2-201ENST00000572227 430 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 MIR3614-201ENST00000581261 86 ntBASIC5.19□□□□□ -1.58
CALR3Q96L12 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.19□□□□□ -1.58
CALR3Q96L12 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.19□□□□□ -1.58
CALR3Q96L12 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CALR3Q96L12 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CALR3Q96L12 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.19□□□□□ -1.58
CALR3Q96L12 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.19□□□□□ -1.58
CALR3Q96L12 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CALR3Q96L12 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CALR3Q96L12 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CALR3Q96L12 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.18□□□□□ -1.58
CALR3Q96L12 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CALR3Q96L12 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CALR3Q96L12 AC139713.2-215ENST00000641428 5037 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.18□□□□□ -1.58
CALR3Q96L12 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
CALR3Q96L12 RNU6-379P-201ENST00000363813 104 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 RNU1-43P-201ENST00000365052 165 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 RNU6-898P-201ENST00000365627 104 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 Y_RNA.461-201ENST00000384263 103 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 Y_RNA.489-201ENST00000384410 101 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 MIR190B-201ENST00000401119 79 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 MIR1302-6-201ENST00000408466 90 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 AL355433.1-201ENST00000422804 300 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.18□□□□□ -1.58
CALR3Q96L12 HMGB3P8-201ENST00000449709 577 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 AL389915.2-201ENST00000454576 441 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.18□□□□□ -1.58
CALR3Q96L12 RPL23AP65-201ENST00000475608 468 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.18□□□□□ -1.58
CALR3Q96L12 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.18□□□□□ -1.58
CALR3Q96L12 AC078899.3-201ENST00000599065 212 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 AC006557.5-201ENST00000603126 811 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.18□□□□□ -1.58
CALR3Q96L12 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CALR3Q96L12 CR381572.2-201ENST00000624852 397 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.18□□□□□ -1.58
CALR3Q96L12 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CALR3Q96L12 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CALR3Q96L12 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CALR3Q96L12 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CALR3Q96L12 AC109780.1-201ENST00000451768 1344 ntBASIC5.18□□□□□ -1.58
CALR3Q96L12 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CALR3Q96L12 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CALR3Q96L12 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CALR3Q96L12 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CALR3Q96L12 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.17□□□□□ -1.58
CALR3Q96L12 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.17□□□□□ -1.58
CALR3Q96L12 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CALR3Q96L12 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.17□□□□□ -1.58
CALR3Q96L12 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.17□□□□□ -1.58
CALR3Q96L12 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CALR3Q96L12 AC233263.6-201ENST00000631132 1963 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.17□□□□□ -1.58
CALR3Q96L12 OR56A5-201ENST00000340110 738 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 U3.2-201ENST00000362981 210 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 RNU1-83P-201ENST00000363426 164 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 RNU6-770P-201ENST00000363929 105 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 Y_RNA.222-201ENST00000364264 102 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 RNU6-472P-201ENST00000384299 107 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 Y_RNA.471-201ENST00000384312 102 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 MIR888-201ENST00000401186 77 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.17□□□□□ -1.58
CALR3Q96L12 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.17□□□□□ -1.58
CALR3Q96L12 TRAPPC2P4-201ENST00000421750 331 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 MTCO3P29-201ENST00000432119 779 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.17□□□□□ -1.58
CALR3Q96L12 AC098831.1-201ENST00000440661 216 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.17□□□□□ -1.58
CALR3Q96L12 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.17□□□□□ -1.58
CALR3Q96L12 SNRPCP2-201ENST00000504370 475 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 RNU7-175P-201ENST00000515915 61 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 RNU2-53P-201ENST00000516257 147 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 AC034114.1-201ENST00000520293 285 ntBASIC5.17□□□□□ -1.58
CALR3Q96L12 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms