Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 MIR6830-201ENST00000636015 70 ntBASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-3Q8TAU0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NKX2-3Q8TAU0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.84□□□□□ -1.48
NKX2-3Q8TAU0 AC083843.2-201ENST00000568248 6253 ntBASIC5.84□□□□□ -1.48
NKX2-3Q8TAU0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 AP001284.1-201ENST00000528393 2118 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 AC074290.1-201ENST00000448883 135 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 RPL23AP2-201ENST00000471227 466 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 ENPP7P11-201ENST00000505915 627 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 RNU6-659P-201ENST00000516454 104 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 Y_RNA.709-201ENST00000516952 92 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 SUMO2P18-201ENST00000518873 252 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 CR383656.7-201ENST00000548164 174 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 AC005828.6-201ENST00000606610 232 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 TUG1_4.1-201ENST00000619464 181 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 AC008568.2-201ENST00000623862 2313 ntBASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX2-3Q8TAU0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 U3.6-201ENST00000363622 211 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 Y_RNA.534-201ENST00000384599 112 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 RPL21P67-201ENST00000402896 478 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 AC063979.1-201ENST00000415539 377 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 AC016700.2-201ENST00000446011 156 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 RN7SL319P-201ENST00000480656 221 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 RN7SL604P-201ENST00000492589 296 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 Y_RNA.694-201ENST00000516677 117 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 NDUFB4P11-201ENST00000560510 395 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 MIR4277-201ENST00000578298 84 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 RPL23AP88-201ENST00000605759 454 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 AC008758.3-201ENST00000507003 1829 ntBASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.82□□□□□ -1.48
NKX2-3Q8TAU0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 RNU6-249P-201ENST00000363016 102 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 MIR513C-201ENST00000401352 84 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 RN7SKP100-201ENST00000411258 284 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 AC099677.1-201ENST00000420575 175 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 HMGB3P3-201ENST00000510526 400 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 RNU1-86P-201ENST00000516108 154 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 MIR892C-201ENST00000516410 77 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 RNU1-107P-201ENST00000516617 154 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 RPL23AP87-202ENST00000573039 466 ntBASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NKX2-3Q8TAU0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 AC000374.1-201ENST00000434698 1745 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 RNVU1-3-201ENST00000364313 161 ntBASIC5.8□□□□□ -1.48
NKX2-3Q8TAU0 RNU6-926P-201ENST00000384075 107 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms