Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 DPPA2P1-201ENST00000428060 556 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.58□□□□□ -1.84
USP38Q8NB14 MTCO3P5-201ENST00000433620 714 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.58□□□□□ -1.84
USP38Q8NB14 TAAR7P-201ENST00000436141 242 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 AL451074.3-201ENST00000437709 472 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 MTND4P25-201ENST00000441039 533 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.58□□□□□ -1.84
USP38Q8NB14 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.58□□□□□ -1.84
USP38Q8NB14 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.58□□□□□ -1.84
USP38Q8NB14 AL513124.1-201ENST00000450410 614 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.58□□□□□ -1.84
USP38Q8NB14 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 AP002884.2-201ENST00000471647 395 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 RN7SKP258-201ENST00000517151 304 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 RNA5SP291-201ENST00000517222 105 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.58□□□□□ -1.84
USP38Q8NB14 CASP1P1-201ENST00000526345 212 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP38Q8NB14 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.58□□□□□ -1.84
USP38Q8NB14 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.58□□□□□ -1.84
USP38Q8NB14 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.58□□□□□ -1.84
USP38Q8NB14 AC007619.2-201ENST00000605743 379 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 AP002360.4-201ENST00000606980 481 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 AC009570.1-201ENST00000609599 745 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.58□□□□□ -1.84
USP38Q8NB14 AC073476.4-201ENST00000628409 72 ntBASIC3.58□□□□□ -1.84
USP38Q8NB14 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
USP38Q8NB14 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
USP38Q8NB14 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
USP38Q8NB14 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC073343.1-201ENST00000328239 651 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
USP38Q8NB14 RNU6-288P-201ENST00000363690 104 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 GSTA9P-201ENST00000406231 611 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP38Q8NB14 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.57□□□□□ -1.84
USP38Q8NB14 GPR143P-201ENST00000434155 205 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 HMGB3P11-201ENST00000440127 604 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.57□□□□□ -1.84
USP38Q8NB14 FABP5P13-201ENST00000452144 328 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 MTCYBP1-201ENST00000454315 1119 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 AC013267.1-201ENST00000458227 267 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 RN7SL863P-201ENST00000462370 296 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC023194.1-201ENST00000493084 308 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC068657.1-201ENST00000520807 306 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 AP006587.4-201ENST00000526053 529 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 AP002404.1-201ENST00000532005 451 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.57□□□□□ -1.84
USP38Q8NB14 SUB1P2-201ENST00000556401 297 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.57□□□□□ -1.84
USP38Q8NB14 MIR4524B-201ENST00000581569 115 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 AC084782.3-201ENST00000612282 578 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 AC068831.7-201ENST00000616954 363 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC090740.1-201ENST00000623193 2262 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC098679.4-201ENST00000624241 654 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 OR5AK4P-201ENST00000635912 903 ntBASIC3.57□□□□□ -1.84
USP38Q8NB14 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
USP38Q8NB14 AC103988.1-201ENST00000566382 2177 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 MTND5P26-201ENST00000426018 1752 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP38Q8NB14 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP38Q8NB14 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
USP38Q8NB14 RN7SKP226-201ENST00000364912 300 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 SMIM11P1-201ENST00000369586 178 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 MIR558-201ENST00000384920 94 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 SAR1AP2-201ENST00000392696 594 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 RPS4XP3-201ENST00000398541 413 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 AL354719.1-201ENST00000406535 843 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 RNU2-39P-201ENST00000410604 198 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.56□□□□□ -1.84
USP38Q8NB14 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.56□□□□□ -1.84
USP38Q8NB14 AL512844.2-201ENST00000433990 593 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 SNRPEP4-201ENST00000435815 279 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 RPL7P5-201ENST00000471472 736 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 AC007182.2-201ENST00000489251 402 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
USP38Q8NB14 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.56□□□□□ -1.84
USP38Q8NB14 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.56□□□□□ -1.84
USP38Q8NB14 RNU6-410P-201ENST00000517006 107 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 SCARNA20.6-201ENST00000517251 106 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.56□□□□□ -1.84
USP38Q8NB14 AC090572.1-201ENST00000519251 160 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.56□□□□□ -1.84
USP38Q8NB14 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.56□□□□□ -1.84
USP38Q8NB14 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.56□□□□□ -1.84
USP38Q8NB14 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.56□□□□□ -1.84
USP38Q8NB14 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.56□□□□□ -1.84
USP38Q8NB14 AC007363.1-201ENST00000604736 620 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 AC007684.1-201ENST00000609671 477 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 uc_338.1-201ENST00000612113 180 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms