Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AL163153.1-201ENST00000554223 283 ntBASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 AC055876.1-202ENST00000567053 138 ntBASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 AP001029.3-201ENST00000588063 596 ntBASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 AC025449.1-201ENST00000603896 529 ntBASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 AC106900.2-201ENST00000604994 317 ntBASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 AC139792.3-201ENST00000623525 224 ntBASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 MTND5P27-201ENST00000428871 1720 ntBASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PCDH20Q8N6Y1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 RNU6-1085P-201ENST00000363576 107 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 Y_RNA.372-201ENST00000365599 102 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 SMIM11P1-201ENST00000369586 178 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 Y_RNA.409-201ENST00000383990 98 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 RNU6-701P-201ENST00000384059 107 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 RPS4XP8-201ENST00000402039 771 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AL513331.1-201ENST00000411908 397 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 ZNF90P2-204ENST00000419323 1075 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC093106.2-201ENST00000428212 385 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 RPL36AP6-201ENST00000435770 321 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 UBE2V1P8-201ENST00000437166 265 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 RPL23AP20-201ENST00000447965 421 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC115115.1-201ENST00000449927 248 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC126389.1-201ENST00000477436 290 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC117522.1-201ENST00000509821 380 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 SNORD27.1-201ENST00000516319 72 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 RN7SKP258-201ENST00000517151 304 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 RNA5SP380-201ENST00000517190 98 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC027807.1-201ENST00000559921 996 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 HMGB1P33-201ENST00000563485 527 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 MTATP6P3-201ENST00000581686 676 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AL589994.2-201ENST00000621124 579 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC091953.5-201ENST00000622919 233 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC091903.1-201ENST00000624322 454 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AL160394.1-201ENST00000624765 724 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 AC005609.4-201ENST00000625071 447 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDH20Q8N6Y1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 ELF2P3-201ENST00000445099 1506 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 RNU6-780P-201ENST00000391030 104 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AL590002.1-201ENST00000406554 418 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 RNU2-9P-201ENST00000410194 145 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 SDCBPP3-201ENST00000419629 891 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 USP9YP18-201ENST00000425912 695 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AL356867.1-201ENST00000429623 299 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 MTATP6P16-201ENST00000434543 526 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 CYCSP32-201ENST00000440548 321 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC006483.1-201ENST00000487308 313 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 RNA5SP217-201ENST00000515959 91 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC245166.1-201ENST00000521012 253 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AP006587.4-201ENST00000526053 529 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AP001646.1-201ENST00000527936 915 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 HMGB1P6-201ENST00000569046 646 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 MIR4325-201ENST00000583049 90 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 DPPA3P3-201ENST00000603842 430 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC007363.1-201ENST00000604736 620 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AP001330.5-201ENST00000607176 411 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC090517.2-201ENST00000614966 680 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 AC099506.2-201ENST00000623074 221 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 ZNF680P1-201ENST00000436625 1469 ntBASIC3.19□□□□□ -1.9
PCDH20Q8N6Y1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PCDH20Q8N6Y1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PCDH20Q8N6Y1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDH20Q8N6Y1 AC008568.2-201ENST00000623862 2313 ntBASIC3.18□□□□□ -1.9
PCDH20Q8N6Y1 RNU4-12P-201ENST00000365233 139 ntBASIC3.18□□□□□ -1.9
PCDH20Q8N6Y1 SNORD15B-201ENST00000384714 146 ntBASIC3.18□□□□□ -1.9
PCDH20Q8N6Y1 CIR1P3-201ENST00000405137 479 ntBASIC3.18□□□□□ -1.9
PCDH20Q8N6Y1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms