Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC098869.1-201ENST00000481627 292 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 AC087190.1-201ENST00000484462 480 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 AC107032.1-201ENST00000485945 480 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 AC139453.3-201ENST00000493276 369 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 SNORA31.6-201ENST00000516241 130 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 AC007458.1-201ENST00000542812 373 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 AC104581.2-201ENST00000572227 430 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 AL356218.2-201ENST00000605264 187 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 AP005432.2-201ENST00000608162 586 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.11□□□□□ -1.59
SIX5Q8N196 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX5Q8N196 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.11□□□□□ -1.59
SIX5Q8N196 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX5Q8N196 RLIMP1-201ENST00000339626 1680 ntBASIC5.11□□□□□ -1.59
SIX5Q8N196 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.11□□□□□ -1.59
SIX5Q8N196 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SIX5Q8N196 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SIX5Q8N196 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX5Q8N196 AL590240.1-201ENST00000334118 313 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SIX5Q8N196 RNA5SP388-201ENST00000362584 119 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 Y_RNA.405-201ENST00000383979 100 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 Y_RNA.451-201ENST00000384200 100 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 Y_RNA.524-201ENST00000384564 100 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 Y_RNA.561-201ENST00000384694 100 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 MIR589-201ENST00000385238 99 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 BTF3L4P2-201ENST00000392798 346 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.1□□□□□ -1.59
SIX5Q8N196 RPL23AP1-201ENST00000428990 471 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.1□□□□□ -1.59
SIX5Q8N196 AL445433.1-201ENST00000457507 257 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX5Q8N196 RN7SL197P-201ENST00000466981 299 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 AC034236.1-201ENST00000469891 373 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.1□□□□□ -1.59
SIX5Q8N196 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX5Q8N196 MIR2355-201ENST00000517199 87 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 CASP1P1-201ENST00000526345 212 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SIX5Q8N196 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.1□□□□□ -1.59
SIX5Q8N196 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX5Q8N196 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.1□□□□□ -1.59
SIX5Q8N196 AC023575.1-201ENST00000580510 358 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 RPL23AP78-201ENST00000599928 470 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 AC005046.1-201ENST00000608515 625 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX5Q8N196 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.1□□□□□ -1.59
SIX5Q8N196 AC027309.3-201ENST00000623419 351 ntBASIC5.1□□□□□ -1.59
SIX5Q8N196 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SIX5Q8N196 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SIX5Q8N196 AL731532.2-201ENST00000623542 1953 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.09□□□□□ -1.59
SIX5Q8N196 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SIX5Q8N196 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SIX5Q8N196 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIX5Q8N196 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SIX5Q8N196 MIR335-201ENST00000362173 94 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 Y_RNA.54-201ENST00000362766 105 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 RN7SKP145-201ENST00000363291 303 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
SIX5Q8N196 RPL21P75-201ENST00000396599 483 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 RPL21P28-201ENST00000401418 483 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 AL590556.1-201ENST00000423231 483 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 HIGD1AP2-201ENST00000446367 280 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 AL139109.1-201ENST00000455491 297 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 RPL21P11-201ENST00000461458 483 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 RPL21P39-201ENST00000463605 483 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 AC132942.1-201ENST00000486753 483 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 AC093591.1-201ENST00000491435 481 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 RPL21P16-201ENST00000495531 483 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 AC093840.1-201ENST00000511599 336 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 Y_RNA.700-201ENST00000516806 100 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 SYF2P1-201ENST00000550658 413 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 MIR3160-1-201ENST00000577972 85 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 AC010632.3-201ENST00000611377 369 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 AP001282.2-201ENST00000616149 309 ntBASIC5.09□□□□□ -1.59
SIX5Q8N196 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX5Q8N196 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.09□□□□□ -1.59
SIX5Q8N196 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX5Q8N196 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
SIX5Q8N196 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIX5Q8N196 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SIX5Q8N196 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.09□□□□□ -1.59
SIX5Q8N196 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
SIX5Q8N196 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
SIX5Q8N196 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SIX5Q8N196 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SIX5Q8N196 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
SIX5Q8N196 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SIX5Q8N196 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
SIX5Q8N196 AC025031.4-201ENST00000621248 3271 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SIX5Q8N196 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.08□□□□□ -1.6
SIX5Q8N196 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
SIX5Q8N196 RNA5SP447-201ENST00000363749 119 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 Y_RNA.237-201ENST00000364439 102 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 RNU6-338P-201ENST00000383888 105 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 SNORA70F-201ENST00000384142 135 ntBASIC5.08□□□□□ -1.6
SIX5Q8N196 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SIX5Q8N196 SNORA48.7-201ENST00000391302 135 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms