Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MIR888-201ENST00000401186 77 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AL359634.1-202ENST00000404721 284 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 RNU6-1328P-201ENST00000410938 106 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 USP9YP13-201ENST00000417797 480 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 ELOCP14-201ENST00000428070 331 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 ELOCP7-201ENST00000439968 331 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 RPL7P36-201ENST00000444633 681 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 RNU7-59P-201ENST00000459101 61 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AC004924.1-201ENST00000480160 781 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 RPS27AP10-201ENST00000496103 208 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AC110760.3-202ENST00000515177 371 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AP000907.2-201ENST00000530827 353 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AL359212.1-201ENST00000556608 614 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AGGF1P5-201ENST00000567900 919 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 BNIP3P40-201ENST00000596017 556 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 NRBF2P5-201ENST00000603087 788 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AC006023.1-201ENST00000603944 259 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AC091965.4-201ENST00000607691 587 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AL391813.2-201ENST00000609113 322 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 MIR6840-201ENST00000611937 71 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AP003485.2-201ENST00000623636 610 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AL160394.1-201ENST00000624765 724 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 ZNF658B-202ENST00000615961 3375 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC50Q8IVM0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CCDC50Q8IVM0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 RNU6-1167P-201ENST00000363227 94 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 BPY2DP-201ENST00000422208 265 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 HMGN2P38-201ENST00000423806 265 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC098614.2-201ENST00000426040 255 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 RNU6-311P-201ENST00000516224 102 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 RNU5A-4P-201ENST00000516588 111 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 RNA5SP165-201ENST00000517142 115 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC087276.1-201ENST00000529659 480 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC093012.1-202ENST00000549403 582 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 MIR3117-201ENST00000584034 78 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC098826.3-201ENST00000603823 466 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AL031281.1-201ENST00000604049 488 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AL160281.1-201ENST00000605307 311 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC239868.4-201ENST00000608318 671 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC013562.2-201ENST00000611632 603 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC022960.3-201ENST00000619794 441 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AP000553.5-201ENST00000641933 54 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 AC016717.2-201ENST00000609089 5141 ntBASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC50Q8IVM0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AL136360.1-201ENST00000503377 1900 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 OR56A5-201ENST00000340110 738 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 RNU6-512P-201ENST00000364438 103 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 RNU6-1200P-201ENST00000384162 107 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 RPS4XP8-201ENST00000402039 771 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 HMGB1P11-201ENST00000413899 637 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AC009963.1-201ENST00000417265 157 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AL035407.1-201ENST00000429211 571 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 PGBD4P3-201ENST00000440731 581 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AL049873.1-201ENST00000480540 376 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AC020699.1-201ENST00000505161 445 ntBASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC50Q8IVM0 AP000889.2-201ENST00000532684 490 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms