Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPL21P90-201ENST00000415692 466 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AL589880.1-201ENST00000448271 287 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 MTND4LP3-201ENST00000468320 276 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 SNORA48.10-201ENST00000516965 160 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC022880.1-201ENST00000534017 973 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AP001330.4-201ENST00000604350 154 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC004852.3-201ENST00000614131 326 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC091304.6-201ENST00000619761 202 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 RNU5D-1-201ENST00000363299 116 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 Y_RNA.167-201ENST00000363735 109 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 Y_RNA.518-201ENST00000384552 113 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 RNU2-40P-201ENST00000410833 196 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 GDI2P2-201ENST00000445131 608 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC114786.4-201ENST00000508771 728 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC114797.1-201ENST00000514003 728 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AL009028.1-201ENST00000604895 802 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC093838.1-201ENST00000613014 469 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 AC073592.7-201ENST00000623659 507 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 RNU6-1074P-201ENST00000383995 104 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RNU6-17P-201ENST00000384245 107 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RNU6-18P-201ENST00000384527 107 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AL356432.1-201ENST00000405809 419 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 ZNF90P2-204ENST00000419323 1075 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RPL23AP6-201ENST00000446637 472 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RPL31P53-201ENST00000457065 348 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RPS27P21-201ENST00000486977 252 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 NDUFS5P6-201ENST00000529136 295 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AL049870.4-201ENST00000555741 486 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC009090.3-201ENST00000616553 565 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RNU6-173P-201ENST00000364215 104 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AL139397.2-201ENST00000404529 772 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC000111.3-201ENST00000433478 193 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 CIR1P1-201ENST00000524055 1133 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 EIF4EP5-201ENST00000528228 640 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC087465.1-201ENST00000560574 245 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC104229.1-201ENST00000561364 255 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC055876.5-201ENST00000605667 259 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 U6.48-201ENST00000618523 106 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 MTND5P30-201ENST00000452896 1731 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RNA5SP276-201ENST00000362580 94 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RNU6-666P-201ENST00000363499 107 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 Y_RNA.280-201ENST00000364765 112 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RNU6-920P-201ENST00000410926 92 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 HSPE1P24-201ENST00000450782 238 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 RPS29P23-201ENST00000458635 123 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AL121769.1-201ENST00000469473 401 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC087879.1-201ENST00000474343 374 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 OR6C7P-201ENST00000547875 934 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC024619.4-201ENST00000580924 316 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 SNORD114-21-201ENST00000606412 72 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AC079597.1-201ENST00000624306 508 ntBASIC0.64□□□□□ -2.31
CSMD3Q7Z407 AL022578.1-201ENST00000439330 1433 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 SNORA62.1-201ENST00000364287 154 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 RNU6-16P-201ENST00000384385 107 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.63□□□□□ -2.31
CSMD3Q7Z407 MIR4529-201ENST00000578110 78 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.63□□□□□ -2.31
CSMD3Q7Z407 AC012443.1-201ENST00000605605 231 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.63□□□□□ -2.31
CSMD3Q7Z407 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.63□□□□□ -2.31
CSMD3Q7Z407 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CSMD3Q7Z407 AL356379.1-201ENST00000414105 126 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 MTCO3P12-201ENST00000416718 547 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.63□□□□□ -2.31
CSMD3Q7Z407 OR6C72P-201ENST00000451403 892 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.63□□□□□ -2.31
CSMD3Q7Z407 MRPS33P3-201ENST00000513456 322 ntBASIC0.63□□□□□ -2.31
CSMD3Q7Z407 SNORA48.9-201ENST00000516419 162 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms