Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NDUFB4P10-201ENST00000452541 359 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 RPS26P28-201ENST00000470806 348 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 NIP7P2-201ENST00000485801 544 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 AC005798.1-201ENST00000513715 387 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 SERF1AP1-201ENST00000514575 187 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 RNU6-861P-201ENST00000516745 106 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 MIR2116-201ENST00000517221 80 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 AL158827.2-201ENST00000602494 330 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 AC015813.4-201ENST00000610469 179 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 TUG1_2.1-201ENST00000614234 87 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 U3.53-201ENST00000628922 216 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 AL691447.3-201ENST00000635020 330 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF43Q68DV7 AC116667.1-201ENST00000604855 2072 ntBASIC4.77□□□□□ -1.65
RNF43Q68DV7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF43Q68DV7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF43Q68DV7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF43Q68DV7 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF43Q68DV7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
RNF43Q68DV7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF43Q68DV7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF43Q68DV7 SNORD81.1-201ENST00000363064 77 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 Y_RNA.533-201ENST00000384596 114 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 SNORD115-46-201ENST00000390982 71 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 LAP3P1-201ENST00000403648 294 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 Y_RNA.592-201ENST00000410274 109 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF43Q68DV7 FHP1-201ENST00000442741 703 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 AC008264.1-201ENST00000447612 367 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 AC010655.1-201ENST00000449336 292 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF43Q68DV7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF43Q68DV7 SNORA84-201ENST00000459229 133 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 AC010469.1-201ENST00000463864 576 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 AC108022.1-201ENST00000493466 478 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 RPL7P23-201ENST00000493874 747 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF43Q68DV7 AC067942.3-201ENST00000512025 362 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 SCARNA24.2-201ENST00000516968 130 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.76□□□□□ -1.65
RNF43Q68DV7 AC069113.1-201ENST00000517763 267 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF43Q68DV7 AC100770.1-201ENST00000532310 322 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF43Q68DV7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF43Q68DV7 AC015912.2-201ENST00000571053 181 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF43Q68DV7 RPL7P50-201ENST00000600588 727 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 ZYXP1-201ENST00000617638 118 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF43Q68DV7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF43Q68DV7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RNF43Q68DV7 RLIMP1-201ENST00000339626 1680 ntBASIC4.76□□□□□ -1.65
RNF43Q68DV7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF43Q68DV7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF43Q68DV7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF43Q68DV7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF43Q68DV7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF43Q68DV7 AC092079.1-201ENST00000558620 1985 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF43Q68DV7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 RNVU1-3-201ENST00000364313 161 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 Y_RNA.458-201ENST00000384240 102 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 SNORA70C-201ENST00000384538 135 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 RNU2-20P-201ENST00000410425 191 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 RNU4-65P-201ENST00000410473 140 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 RNU6-325P-201ENST00000411132 105 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 AL160275.3-201ENST00000423876 471 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 AL445305.1-201ENST00000432577 575 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 AC073063.1-201ENST00000434352 607 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 OR4C10P-201ENST00000434991 931 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 HMGN2P13-201ENST00000476476 274 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 RPL31P60-201ENST00000478450 367 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 AC015795.1-201ENST00000513669 327 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 AF186190.1-201ENST00000517470 480 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 AC069240.1-201ENST00000548774 375 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 AC174048.1-201ENST00000603389 144 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 AC007619.2-201ENST00000605743 379 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 MIR3976-201ENST00000606807 139 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RNF43Q68DV7 Z75746.1-201ENST00000440243 2080 ntBASIC4.75□□□□□ -1.65
RNF43Q68DV7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RNF43Q68DV7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RNF43Q68DV7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms