Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RPL36AP41-201ENST00000493820 306 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RFPL4AP5-201ENST00000514977 504 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-638P-201ENST00000516582 104 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC136777.2-201ENST00000522979 358 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC092490.3-201ENST00000545370 572 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 MIR4782-201ENST00000577987 79 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC011447.4-201ENST00000587562 111 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC107294.1-201ENST00000609524 467 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 snoZ196.1-201ENST00000625269 89 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 U6.95-201ENST00000636931 70 ntBASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RNFT1Q5M7Z0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 ASNSP1-201ENST00000518311 1939 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 UBE2L2-201ENST00000254302 429 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 U3.3-201ENST00000362986 216 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-281P-201ENST00000384212 103 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-1145P-201ENST00000384246 107 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 MIR600-201ENST00000385007 98 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 MIR329-1-201ENST00000385028 80 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 SNORA12.1-201ENST00000390873 148 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-460P-201ENST00000391158 108 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-1025P-201ENST00000410629 104 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AL158823.1-201ENST00000418441 478 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 NDUFB4P7-201ENST00000423198 363 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AC073465.2-201ENST00000440938 498 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 PTMAP3-201ENST00000447474 330 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AL353705.4-201ENST00000449661 238 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AC087588.1-201ENST00000462203 316 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 RPS29P24-201ENST00000486345 171 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 RPL31P61-201ENST00000496160 376 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AC004980.4-201ENST00000513375 203 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 RNU6-377P-201ENST00000515965 102 ntBASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
RNFT1Q5M7Z0 THAP12P5-201ENST00000405864 2275 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AC100757.1-201ENST00000616872 1835 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 SNURFL-201ENST00000309296 343 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 RN7SKP104-201ENST00000362605 328 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 RNU6-1001P-201ENST00000411265 100 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AL158156.1-201ENST00000422509 473 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AL391219.1-201ENST00000422570 483 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AIMP1P2-201ENST00000425294 312 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 EEF1A1P1-201ENST00000447052 739 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 RPS23P1-201ENST00000491662 432 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 RNU2-56P-201ENST00000516826 190 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 BNIP3P5-201ENST00000562290 498 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AC244107.2-201ENST00000611773 76 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 BCORP1-203ENST00000513194 5093 ntBASIC4.77□□□□□ -1.65
RNFT1Q5M7Z0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms