Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMEM259Q4ZIN3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TMEM259Q4ZIN3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TMEM259Q4ZIN3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
TMEM259Q4ZIN3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TMEM259Q4ZIN3 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 RNU4-90P-201ENST00000362773 141 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 RNU6-1279P-201ENST00000383917 103 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 RNU6-102P-201ENST00000384485 104 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 PPIAP31-201ENST00000405422 495 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 U3.36-201ENST00000408418 213 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 COX5BP7-201ENST00000414780 274 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 RPS15AP7-201ENST00000439294 405 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 AL031659.1-201ENST00000447075 539 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 RPL7AP6-201ENST00000477943 801 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 RN7SL826P-201ENST00000479724 288 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 AC091912.1-201ENST00000511351 248 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 Vault.1-201ENST00000516474 102 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 AC040958.1-201ENST00000561102 201 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 AC006116.3-201ENST00000592968 361 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 U2.14-201ENST00000615943 113 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 AC024581.2-201ENST00000619986 252 ntBASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TMEM259Q4ZIN3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AC015813.6-201ENST00000624409 5808 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RNU6-600P-201ENST00000362524 99 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RNU1-108P-201ENST00000362556 161 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 Y_RNA.199-201ENST00000364014 102 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RNU6-290P-201ENST00000365212 101 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RNU6-886P-201ENST00000384319 105 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RNA5SP241-201ENST00000391326 114 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 MIR937-201ENST00000401271 86 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 MIR1271-201ENST00000408537 86 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 HMGN2P30-201ENST00000423237 256 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AL356535.1-201ENST00000440335 398 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AC073465.2-201ENST00000440938 498 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AC087477.1-201ENST00000465747 340 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RPL23AP14-201ENST00000468281 468 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AP000870.1-201ENST00000472927 406 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RPL30P5-201ENST00000494923 336 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AC231760.1-201ENST00000498002 260 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RNU6-406P-201ENST00000516470 107 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RNU6-1282P-201ENST00000516735 96 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AC024940.3-201ENST00000538551 316 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 MIR4643-201ENST00000577473 78 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RN7SL290P-201ENST00000578661 300 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 RN7SL708P-201ENST00000580952 299 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 AL353743.1-202ENST00000431724 1695 ntBASIC5.31□□□□□ -1.56
TMEM259Q4ZIN3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 SNORD115-32-201ENST00000364079 82 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 RNU6-142P-201ENST00000384019 107 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 SNORD63-201ENST00000384262 68 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 SNORD116-20-201ENST00000384529 92 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 EIF1P2-201ENST00000428233 350 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 OR4C10P-201ENST00000434991 931 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 AC098831.1-201ENST00000440661 216 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 Y_RNA.644-201ENST00000459006 113 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 SNRPGP7-201ENST00000469016 106 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 AP000797.2-201ENST00000475768 606 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 Y_RNA.674-201ENST00000516362 113 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 AP006245.1-201ENST00000522549 120 ntBASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.3□□□□□ -1.56
TMEM259Q4ZIN3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms