Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH12P55289 Y_RNA.72-201ENST00000362894 103 ntBASIC3.23□□□□□ -1.89
CDH12P55289 RN7SKP227-201ENST00000364445 330 ntBASIC3.23□□□□□ -1.89
CDH12P55289 RNU6-522P-201ENST00000364497 107 ntBASIC3.23□□□□□ -1.89
CDH12P55289 RNA5SP51-201ENST00000364750 119 ntBASIC3.23□□□□□ -1.89
CDH12P55289 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH12P55289 RAB28P1-201ENST00000411517 641 ntBASIC3.23□□□□□ -1.89
CDH12P55289 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH12P55289 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH12P55289 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH12P55289 AL513185.2-201ENST00000425543 193 ntBASIC3.23□□□□□ -1.89
CDH12P55289 CALM2P2-201ENST00000428512 440 ntBASIC3.23□□□□□ -1.89
CDH12P55289 ARF4P2-201ENST00000430209 526 ntBASIC3.23□□□□□ -1.89
CDH12P55289 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH12P55289 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH12P55289 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH12P55289 RNU6-953P-201ENST00000459154 107 ntBASIC3.23□□□□□ -1.89
CDH12P55289 SNRPGP3-201ENST00000469405 227 ntBASIC3.23□□□□□ -1.89
CDH12P55289 RPL23AP11-201ENST00000475260 469 ntBASIC3.23□□□□□ -1.89
CDH12P55289 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.23□□□□□ -1.89
CDH12P55289 AL049830.2-201ENST00000480072 201 ntBASIC3.23□□□□□ -1.89
CDH12P55289 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH12P55289 RN7SKP21-201ENST00000516503 220 ntBASIC3.23□□□□□ -1.89
CDH12P55289 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH12P55289 MTND4P7-201ENST00000523876 130 ntBASIC3.23□□□□□ -1.89
CDH12P55289 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH12P55289 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.23□□□□□ -1.89
CDH12P55289 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH12P55289 AC007823.1-201ENST00000569932 1566 ntBASIC3.23□□□□□ -1.89
CDH12P55289 AC002545.1-201ENST00000592511 181 ntBASIC3.23□□□□□ -1.89
CDH12P55289 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH12P55289 LARP7P1-201ENST00000605576 316 ntBASIC3.23□□□□□ -1.89
CDH12P55289 AC025253.1-201ENST00000613623 543 ntBASIC3.23□□□□□ -1.89
CDH12P55289 AL359547.2-201ENST00000615810 418 ntBASIC3.23□□□□□ -1.89
CDH12P55289 AL136221.1-201ENST00000621449 509 ntBASIC3.23□□□□□ -1.89
CDH12P55289 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH12P55289 MIR6810-201ENST00000622701 70 ntBASIC3.23□□□□□ -1.89
CDH12P55289 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH12P55289 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH12P55289 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.23□□□□□ -1.89
CDH12P55289 MTND4P14-201ENST00000435799 1354 ntBASIC3.23□□□□□ -1.89
CDH12P55289 MTND4P12-201ENST00000498999 1377 ntBASIC3.23□□□□□ -1.89
CDH12P55289 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH12P55289 AP001148.1-201ENST00000624124 2359 ntBASIC3.23□□□□□ -1.89
CDH12P55289 HSPA8P4-201ENST00000511877 1920 ntBASIC3.23□□□□□ -1.89
CDH12P55289 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH12P55289 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH12P55289 FRG1CP-201ENST00000358464 769 ntBASIC3.22□□□□□ -1.89
CDH12P55289 SNORD9-201ENST00000362566 104 ntBASIC3.22□□□□□ -1.89
CDH12P55289 RNA5SP515-201ENST00000364570 118 ntBASIC3.22□□□□□ -1.89
CDH12P55289 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
CDH12P55289 RNU6-1127P-201ENST00000384580 107 ntBASIC3.22□□□□□ -1.89
CDH12P55289 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH12P55289 RN7SKP263-201ENST00000411194 309 ntBASIC3.22□□□□□ -1.89
CDH12P55289 BTF3L4P3-201ENST00000418879 476 ntBASIC3.22□□□□□ -1.89
CDH12P55289 RPL23AP82-202ENST00000427528 469 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AP000907.1-201ENST00000428428 510 ntBASIC3.22□□□□□ -1.89
CDH12P55289 HMGB1P27-201ENST00000431429 603 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AC104058.1-201ENST00000448028 297 ntBASIC3.22□□□□□ -1.89
CDH12P55289 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH12P55289 HMGN1P18-201ENST00000457642 277 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AC087588.1-201ENST00000462203 316 ntBASIC3.22□□□□□ -1.89
CDH12P55289 CENPBD1P1-201ENST00000464061 469 ntBASIC3.22□□□□□ -1.89
CDH12P55289 RN7SL330P-201ENST00000469709 307 ntBASIC3.22□□□□□ -1.89
CDH12P55289 VN1R17P-201ENST00000472048 1090 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AP000852.1-201ENST00000472460 573 ntBASIC3.22□□□□□ -1.89
CDH12P55289 RN7SL442P-201ENST00000473804 320 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AC091885.1-201ENST00000506658 268 ntBASIC3.22□□□□□ -1.89
CDH12P55289 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH12P55289 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH12P55289 TTC39CP1-201ENST00000512513 755 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AC008549.1-201ENST00000512900 643 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AC046134.1-201ENST00000514454 666 ntBASIC3.22□□□□□ -1.89
CDH12P55289 Y_RNA.665-201ENST00000516177 98 ntBASIC3.22□□□□□ -1.89
CDH12P55289 SNORA70.18-201ENST00000516696 98 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AC107934.2-201ENST00000518653 310 ntBASIC3.22□□□□□ -1.89
CDH12P55289 BNIP3P6-201ENST00000549284 499 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.22□□□□□ -1.89
CDH12P55289 ZNF192P1-203ENST00000565888 810 ntBASIC3.22□□□□□ -1.89
CDH12P55289 MIR3160-1-201ENST00000577972 85 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH12P55289 AC011712.1-201ENST00000588959 234 ntBASIC3.22□□□□□ -1.89
CDH12P55289 AC013553.2-201ENST00000604244 589 ntBASIC3.22□□□□□ -1.89
CDH12P55289 MIR15A-201ENST00000607334 83 ntBASIC3.22□□□□□ -1.89
CDH12P55289 Y_RNA.804-201ENST00000615262 101 ntBASIC3.22□□□□□ -1.89
CDH12P55289 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH12P55289 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CDH12P55289 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH12P55289 MTND4P35-201ENST00000604257 1375 ntBASIC3.22□□□□□ -1.89
CDH12P55289 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH12P55289 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
CDH12P55289 AC007496.3-201ENST00000624987 3443 ntBASIC3.21□□□□□ -1.9
CDH12P55289 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH12P55289 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
CDH12P55289 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH12P55289 UBE2L2-201ENST00000254302 429 ntBASIC3.21□□□□□ -1.9
CDH12P55289 Y_RNA.167-201ENST00000363735 109 ntBASIC3.21□□□□□ -1.9
CDH12P55289 RN7SKP280-201ENST00000364196 304 ntBASIC3.21□□□□□ -1.9
CDH12P55289 Y_RNA.378-201ENST00000365652 113 ntBASIC3.21□□□□□ -1.9
CDH12P55289 Y_RNA.534-201ENST00000384599 112 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms