Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SNORD19.2-201ENST00000516978 73 ntBASIC2.24□□□□□ -2.05
CDH6P55285 RNA5SP165-201ENST00000517142 115 ntBASIC2.24□□□□□ -2.05
CDH6P55285 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH6P55285 AC026464.5-201ENST00000562497 722 ntBASIC2.24□□□□□ -2.05
CDH6P55285 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CDH6P55285 SNORD53-201ENST00000579969 78 ntBASIC2.24□□□□□ -2.05
CDH6P55285 MIR3199-1-201ENST00000582434 88 ntBASIC2.24□□□□□ -2.05
CDH6P55285 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH6P55285 AC079416.3-201ENST00000624479 549 ntBASIC2.24□□□□□ -2.05
CDH6P55285 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.24□□□□□ -2.05
CDH6P55285 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.24□□□□□ -2.05
CDH6P55285 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.24□□□□□ -2.05
CDH6P55285 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CDH6P55285 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CDH6P55285 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.24□□□□□ -2.05
CDH6P55285 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CDH6P55285 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CDH6P55285 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
CDH6P55285 RNU6-462P-201ENST00000362659 105 ntBASIC2.23□□□□□ -2.05
CDH6P55285 MIR122-201ENST00000385044 85 ntBASIC2.23□□□□□ -2.05
CDH6P55285 RNU6-1176P-201ENST00000390955 107 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AL445529.1-201ENST00000398713 389 ntBASIC2.23□□□□□ -2.05
CDH6P55285 RN7SKP266-201ENST00000410232 287 ntBASIC2.23□□□□□ -2.05
CDH6P55285 USP9YP27-201ENST00000418455 438 ntBASIC2.23□□□□□ -2.05
CDH6P55285 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AC007560.1-201ENST00000426912 237 ntBASIC2.23□□□□□ -2.05
CDH6P55285 MYL8P-204ENST00000431574 518 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH6P55285 EXOSC3P1-201ENST00000448649 500 ntBASIC2.23□□□□□ -2.05
CDH6P55285 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH6P55285 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH6P55285 AC109486.1-201ENST00000486833 374 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AC107222.1-201ENST00000510899 637 ntBASIC2.23□□□□□ -2.05
CDH6P55285 SNORA31.6-201ENST00000516241 130 ntBASIC2.23□□□□□ -2.05
CDH6P55285 SCARNA3-201ENST00000517097 143 ntBASIC2.23□□□□□ -2.05
CDH6P55285 RN7SKP258-201ENST00000517151 304 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AC010186.2-204ENST00000537668 439 ntBASIC2.23□□□□□ -2.05
CDH6P55285 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH6P55285 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH6P55285 AGGF1P5-201ENST00000567900 919 ntBASIC2.23□□□□□ -2.05
CDH6P55285 MIR5571-201ENST00000577998 113 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH6P55285 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.23□□□□□ -2.05
CDH6P55285 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.23□□□□□ -2.05
CDH6P55285 AC021171.1-201ENST00000603137 706 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AL355598.1-201ENST00000604169 202 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AC025588.2-201ENST00000604851 466 ntBASIC2.23□□□□□ -2.05
CDH6P55285 AC012640.5-201ENST00000623897 319 ntBASIC2.23□□□□□ -2.05
CDH6P55285 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDH6P55285 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CDH6P55285 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.23□□□□□ -2.05
CDH6P55285 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDH6P55285 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH6P55285 MTND5P33-201ENST00000571250 1450 ntBASIC2.22□□□□□ -2.05
CDH6P55285 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH6P55285 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH6P55285 AL355497.1-201ENST00000406262 551 ntBASIC2.22□□□□□ -2.05
CDH6P55285 AL359704.1-201ENST00000411586 781 ntBASIC2.22□□□□□ -2.05
CDH6P55285 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CDH6P55285 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH6P55285 IPO7P1-201ENST00000442031 636 ntBASIC2.22□□□□□ -2.05
CDH6P55285 MTATP6P30-201ENST00000443540 664 ntBASIC2.22□□□□□ -2.05
CDH6P55285 AL118520.1-201ENST00000450770 291 ntBASIC2.22□□□□□ -2.05
CDH6P55285 ANKRD26P4-201ENST00000455755 950 ntBASIC2.22□□□□□ -2.05
CDH6P55285 RNU7-59P-201ENST00000459101 61 ntBASIC2.22□□□□□ -2.05
CDH6P55285 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH6P55285 AC008413.1-201ENST00000511864 177 ntBASIC2.22□□□□□ -2.05
CDH6P55285 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH6P55285 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.22□□□□□ -2.05
CDH6P55285 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.22□□□□□ -2.05
CDH6P55285 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH6P55285 AC008121.1-201ENST00000603244 268 ntBASIC2.22□□□□□ -2.05
CDH6P55285 AL161798.1-201ENST00000604630 131 ntBASIC2.22□□□□□ -2.05
CDH6P55285 AL021997.1-201ENST00000605757 193 ntBASIC2.22□□□□□ -2.05
CDH6P55285 DUSP12P1-201ENST00000612874 516 ntBASIC2.22□□□□□ -2.05
CDH6P55285 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH6P55285 AC010678.1-201ENST00000614118 713 ntBASIC2.22□□□□□ -2.05
CDH6P55285 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.22□□□□□ -2.05
CDH6P55285 AC006386.1-201ENST00000619436 415 ntBASIC2.22□□□□□ -2.05
CDH6P55285 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
CDH6P55285 AC112204.3-201ENST00000623822 332 ntBASIC2.22□□□□□ -2.05
CDH6P55285 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.22□□□□□ -2.05
CDH6P55285 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDH6P55285 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.22□□□□□ -2.05
CDH6P55285 MTND5P30-201ENST00000452896 1731 ntBASIC2.22□□□□□ -2.05
CDH6P55285 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDH6P55285 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH6P55285 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH6P55285 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH6P55285 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH6P55285 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDH6P55285 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDH6P55285 MIR19A-201ENST00000384878 82 ntBASIC2.21□□□□□ -2.06
CDH6P55285 RNA5SP508-201ENST00000411327 119 ntBASIC2.21□□□□□ -2.06
CDH6P55285 VN1R51P-201ENST00000411675 945 ntBASIC2.21□□□□□ -2.06
CDH6P55285 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH6P55285 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.21□□□□□ -2.06
CDH6P55285 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.21□□□□□ -2.06
CDH6P55285 RSU1P2-202ENST00000437884 485 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms