Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA2D1P54289 Y_RNA.31-201ENST00000362574 102 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 Y_RNA.144-201ENST00000363521 113 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 Y_RNA.167-201ENST00000363735 109 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 Y_RNA.459-201ENST00000384251 102 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RNU6-308P-201ENST00000390957 107 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA2D1P54289 MTCYBP4-201ENST00000401524 249 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AL136372.1-201ENST00000403060 228 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 HSPE1P8-201ENST00000406997 288 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RPL31P2-201ENST00000413849 377 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RPS29P4-201ENST00000414733 161 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 VN1R36P-201ENST00000414936 291 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 AC017079.2-201ENST00000416102 485 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 YME1L1P1-201ENST00000429435 297 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 TXNP1-201ENST00000441872 371 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 HMGB3P8-201ENST00000449709 577 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 SNRPFP3-201ENST00000457792 225 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RPL23AP11-201ENST00000475260 469 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RPL7P42-201ENST00000481005 679 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 MTCO3P44-201ENST00000510977 541 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 FTH1P9-201ENST00000513251 355 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RNU6-1046P-201ENST00000516538 107 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RNU6-64P-201ENST00000517119 105 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 IGKV2D-36-201ENST00000518643 226 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 MTND4P7-201ENST00000523876 130 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 APOOP3-201ENST00000536787 586 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 AL163153.1-201ENST00000554223 283 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA2D1P54289 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 BNIP3P25-201ENST00000596023 559 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AC136443.5-201ENST00000603741 370 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RMST_8.1-201ENST00000610287 165 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AL390240.1-201ENST00000612950 384 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AL357559.1-201ENST00000622228 274 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 U6.114-201ENST00000636407 96 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA2D1P54289 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA2D1P54289 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
CACNA2D1P54289 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA2D1P54289 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA2D1P54289 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 AC090337.1-201ENST00000579651 2074 ntBASIC3.82□□□□□ -1.8
CACNA2D1P54289 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA2D1P54289 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA2D1P54289 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA2D1P54289 RNU6-179P-201ENST00000363350 107 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 Y_RNA.145-201ENST00000363527 102 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 SNORA22B-201ENST00000383876 138 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 RNU6-1013P-201ENST00000384180 107 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 MT-TC-201ENST00000387405 66 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 MIR548K-201ENST00000408406 116 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC093106.2-201ENST00000428212 385 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA2D1P54289 RPS29P31-201ENST00000446147 164 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC016696.1-201ENST00000446949 318 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 MRPS31P2-201ENST00000451581 518 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 RNU6-1208P-201ENST00000459588 107 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 RPL7P47-201ENST00000497299 556 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 Vault.1-201ENST00000516474 102 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 RN7SKP209-201ENST00000516888 304 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 AP000763.2-201ENST00000540641 163 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC024619.4-201ENST00000580924 316 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 DPPA3P3-201ENST00000603842 430 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AL670379.11-201ENST00000604059 253 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AL670379.10-201ENST00000604330 253 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AL670379.12-201ENST00000605291 253 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AL670379.9-201ENST00000605428 253 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC019193.3-201ENST00000609144 554 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC093838.1-201ENST00000613014 469 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA2D1P54289 EXOC5P1-201ENST00000510543 1969 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
CACNA2D1P54289 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA2D1P54289 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA2D1P54289 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.81□□□□□ -1.8
CACNA2D1P54289 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms