Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIK1P39086 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIK1P39086 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.8□□□□□ -1.64
GRIK1P39086 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC4.8□□□□□ -1.64
GRIK1P39086 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.8□□□□□ -1.64
GRIK1P39086 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
GRIK1P39086 HAUS6P2-201ENST00000433254 2404 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 RNU6-858P-201ENST00000362436 107 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 RNU6-47P-201ENST00000383866 107 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 Y_RNA.526-201ENST00000384572 110 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 RN7SKP159-201ENST00000410657 292 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 RNU2-51P-201ENST00000410708 197 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 ELOCP19-201ENST00000411919 318 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.8□□□□□ -1.64
GRIK1P39086 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.8□□□□□ -1.64
GRIK1P39086 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.8□□□□□ -1.64
GRIK1P39086 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.8□□□□□ -1.64
GRIK1P39086 CKS1BP5-201ENST00000434172 273 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 RPS23P7-201ENST00000466210 444 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 AC135721.1-201ENST00000497954 479 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.8□□□□□ -1.64
GRIK1P39086 RNU6-1338P-201ENST00000516328 91 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 RNA5SP360-201ENST00000516555 118 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 Y_RNA.687-201ENST00000516558 91 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 RNU7-4P-201ENST00000516961 62 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 SCARNA24.2-201ENST00000516968 130 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 Y_RNA.713-201ENST00000517013 96 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 IGLVIV-65-201ENST00000517313 360 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 CYCSP27-201ENST00000527643 293 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 RPS29P30-201ENST00000600975 111 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
GRIK1P39086 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
GRIK1P39086 AL592182.3-201ENST00000642132 3304 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.8□□□□□ -1.64
GRIK1P39086 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.8□□□□□ -1.64
GRIK1P39086 AP000560.1-201ENST00000624150 1937 ntBASIC4.8□□□□□ -1.64
GRIK1P39086 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
GRIK1P39086 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIK1P39086 DHX9P1-201ENST00000436565 3076 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIK1P39086 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIK1P39086 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIK1P39086 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIK1P39086 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
GRIK1P39086 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
GRIK1P39086 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
GRIK1P39086 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
GRIK1P39086 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIK1P39086 EXOC5P1-201ENST00000510543 1969 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 RNU6-989P-201ENST00000362756 107 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 Y_RNA.76-201ENST00000362931 109 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 SNORD50.1-201ENST00000362987 71 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIK1P39086 RNY1P5-201ENST00000383890 115 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 RNU6-804P-201ENST00000384286 107 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GRIK1P39086 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
GRIK1P39086 AC096920.1-201ENST00000423991 241 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.79□□□□□ -1.64
GRIK1P39086 AC006946.1-201ENST00000429106 328 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.79□□□□□ -1.64
GRIK1P39086 TDGF1P1-201ENST00000445734 527 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 SNORD97-201ENST00000459187 142 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.79□□□□□ -1.64
GRIK1P39086 AC015795.1-201ENST00000513669 327 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.79□□□□□ -1.64
GRIK1P39086 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GRIK1P39086 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.79□□□□□ -1.64
GRIK1P39086 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.79□□□□□ -1.64
GRIK1P39086 MIR6715B-201ENST00000637172 77 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIK1P39086 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIK1P39086 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIK1P39086 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
GRIK1P39086 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIK1P39086 AC125257.1-201ENST00000560400 2930 ntBASIC4.79□□□□□ -1.64
GRIK1P39086 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
GRIK1P39086 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
GRIK1P39086 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GRIK1P39086 XIAPP3-201ENST00000312918 795 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 RNU1-83P-201ENST00000363426 164 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AC068538.1-201ENST00000376856 336 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AC092809.3-201ENST00000415453 231 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AL356387.2-201ENST00000422272 243 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AL732292.1-201ENST00000426692 226 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIK1P39086 HMGB1P25-201ENST00000468402 607 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.78□□□□□ -1.64
GRIK1P39086 AC093840.1-201ENST00000511599 336 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 SERF1AP1-201ENST00000514575 187 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 SNORA31.6-201ENST00000516241 130 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AC134698.5-201ENST00000519444 336 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIK1P39086 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIK1P39086 AMZ2P1-203ENST00000565833 850 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AC015912.2-201ENST00000571053 181 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AC136932.1-201ENST00000574771 208 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AL158827.2-201ENST00000602494 330 ntBASIC4.78□□□□□ -1.64
GRIK1P39086 AL078605.1-201ENST00000603529 500 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms