Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD13P35453 RNU6-188P-201ENST00000364207 107 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXD13P35453 SNORA48.2-201ENST00000390926 124 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD13P35453 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXD13P35453 AL138885.1-201ENST00000405921 675 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 RNU2-39P-201ENST00000410604 198 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 RPL35AP12-201ENST00000425362 338 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AL592045.1-201ENST00000429867 352 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.18□□□□□ -1.9
HOXD13P35453 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXD13P35453 AC104850.1-201ENST00000435940 476 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 RPS15AP5-201ENST00000436276 388 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AC098831.1-201ENST00000440661 216 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 MTND2P4-201ENST00000445034 1004 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXD13P35453 GAPDHP17-201ENST00000449858 1001 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 FABP5P13-201ENST00000452144 328 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 MTATP6P7-201ENST00000453315 681 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXD13P35453 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXD13P35453 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.18□□□□□ -1.9
HOXD13P35453 RN7SKP272-201ENST00000516988 232 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AC022616.3-201ENST00000523940 148 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AP002404.1-201ENST00000532005 451 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AC245014.2-201ENST00000603689 287 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AC090578.1-201ENST00000604955 591 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AC246785.4-201ENST00000605374 287 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AC022893.3-201ENST00000607665 437 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 AC013562.2-201ENST00000611632 603 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HOXD13P35453 MIR3199-2-201ENST00000636243 86 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 ELF2P3-201ENST00000445099 1506 ntBASIC3.18□□□□□ -1.9
HOXD13P35453 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXD13P35453 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXD13P35453 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
HOXD13P35453 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXD13P35453 MTND4P35-201ENST00000604257 1375 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXD13P35453 Y_RNA.77-201ENST00000362962 107 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 RNU6-778P-201ENST00000363269 103 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 Y_RNA.201-201ENST00000364052 96 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 SNORD21-201ENST00000383953 95 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 RNU6-641P-201ENST00000384006 107 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD13P35453 BPY2DP-201ENST00000422208 265 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.17□□□□□ -1.9
HOXD13P35453 AC093106.2-201ENST00000428212 385 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 SAR1AP4-201ENST00000429225 591 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 RPL23AP30-201ENST00000432419 501 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AC009961.2-201ENST00000435771 251 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 RNU6-956P-201ENST00000458868 103 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD13P35453 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXD13P35453 RPS27AP10-201ENST00000496103 208 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AC105252.1-201ENST00000503089 286 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AC009901.1-201ENST00000506703 541 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD13P35453 SNORA18.6-201ENST00000516792 115 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXD13P35453 AP000873.5-201ENST00000533906 236 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.17□□□□□ -1.9
HOXD13P35453 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.17□□□□□ -1.9
HOXD13P35453 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD13P35453 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.17□□□□□ -1.9
HOXD13P35453 AC020895.1-201ENST00000595362 272 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AC087752.4-201ENST00000605911 462 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AC109347.2-201ENST00000610220 349 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AL359547.2-201ENST00000615810 418 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 AC091953.5-201ENST00000622919 233 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 U2.21-201ENST00000637295 81 ntBASIC3.17□□□□□ -1.9
HOXD13P35453 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HOXD13P35453 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD13P35453 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD13P35453 TEX21P-201ENST00000447107 1476 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HOXD13P35453 RNU6-39P-201ENST00000384344 107 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXD13P35453 MIR1302-8-201ENST00000408342 128 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AL451074.5-201ENST00000415894 435 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AC096649.2-201ENST00000416186 393 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AL109913.1-201ENST00000421173 514 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD13P35453 AL353729.1-201ENST00000425044 720 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AC098614.2-201ENST00000426040 255 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AC009414.1-201ENST00000427200 443 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD13P35453 GTF2IP20-201ENST00000431663 360 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AL591704.1-201ENST00000432574 275 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AC079781.2-201ENST00000446424 169 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.16□□□□□ -1.9
HOXD13P35453 AC126182.1-201ENST00000478134 357 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AC011825.1-201ENST00000484967 388 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 RPS29P20-201ENST00000489592 171 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 SEM1P1-201ENST00000506694 209 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 AC113155.1-201ENST00000511141 769 ntBASIC3.16□□□□□ -1.9
HOXD13P35453 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.16□□□□□ -1.9
HOXD13P35453 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms