Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC103710.3-201ENST00000608157 948 ntBASIC3.56□□□□□ -1.84
EPHA3P29320 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
EPHA3P29320 uc_338.5-201ENST00000611839 155 ntBASIC3.56□□□□□ -1.84
EPHA3P29320 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.56□□□□□ -1.84
EPHA3P29320 AL133216.2-202ENST00000634512 349 ntBASIC3.56□□□□□ -1.84
EPHA3P29320 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.56□□□□□ -1.84
EPHA3P29320 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
EPHA3P29320 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
EPHA3P29320 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
EPHA3P29320 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
EPHA3P29320 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHA3P29320 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHA3P29320 RNU6-50P-201ENST00000362356 103 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHA3P29320 Y_RNA.414-201ENST00000384011 101 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 RNU6-434P-201ENST00000384376 107 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 AC007390.1-201ENST00000415722 356 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 USP9YP20-201ENST00000419224 558 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.55□□□□□ -1.84
EPHA3P29320 AL158071.1-201ENST00000430315 461 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 PIGFP3-201ENST00000441918 722 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 RPS24P13-201ENST00000442520 397 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 HSFY6P-201ENST00000445573 403 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.55□□□□□ -1.84
EPHA3P29320 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.55□□□□□ -1.84
EPHA3P29320 RPL21P41-201ENST00000459863 264 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 RPL23AP14-201ENST00000468281 468 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.55□□□□□ -1.84
EPHA3P29320 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.55□□□□□ -1.84
EPHA3P29320 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.55□□□□□ -1.84
EPHA3P29320 HIGD1AP13-201ENST00000509878 289 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.55□□□□□ -1.84
EPHA3P29320 Y_RNA.675-201ENST00000516389 149 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 SCARNA14-201ENST00000516903 136 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 RNU6-273P-201ENST00000516937 96 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 AC025884.1-201ENST00000556034 378 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 MIR3942-201ENST00000585264 109 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 AC087045.1-201ENST00000605856 382 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 AC107294.1-201ENST00000609524 467 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 AL132765.2-201ENST00000610812 351 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 U2.17-201ENST00000611454 95 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 AC009233.1-201ENST00000616477 371 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.55□□□□□ -1.84
EPHA3P29320 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.55□□□□□ -1.84
EPHA3P29320 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHA3P29320 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
EPHA3P29320 AC008568.2-201ENST00000623862 2313 ntBASIC3.55□□□□□ -1.84
EPHA3P29320 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.55□□□□□ -1.84
EPHA3P29320 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
EPHA3P29320 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.55□□□□□ -1.84
EPHA3P29320 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
EPHA3P29320 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EPHA3P29320 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
EPHA3P29320 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.54□□□□□ -1.84
EPHA3P29320 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
EPHA3P29320 AC121333.1-201ENST00000567488 2709 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
EPHA3P29320 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
EPHA3P29320 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
EPHA3P29320 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
EPHA3P29320 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
EPHA3P29320 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EPHA3P29320 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
EPHA3P29320 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
EPHA3P29320 DEFB109C-201ENST00000382575 264 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 DEFB109B-201ENST00000382656 264 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AP002088.1-201ENST00000382740 395 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 Y_RNA.509-201ENST00000384506 99 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHA3P29320 MTHFD2P2-201ENST00000407725 247 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AC063979.1-201ENST00000415539 377 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 RPL21P90-201ENST00000415692 466 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHA3P29320 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHA3P29320 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.54□□□□□ -1.84
EPHA3P29320 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.54□□□□□ -1.84
EPHA3P29320 HMGB3P8-201ENST00000449709 577 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHA3P29320 AC084357.1-201ENST00000473404 255 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 KC877373.1-201ENST00000479066 408 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AC110768.1-201ENST00000509222 400 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 MIR2116-201ENST00000517221 80 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AC090136.1-201ENST00000520009 240 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHA3P29320 AC011602.1-201ENST00000546484 331 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
EPHA3P29320 AC093027.1-201ENST00000546698 429 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHA3P29320 AC011611.1-201ENST00000552179 197 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AC090115.3-201ENST00000553218 849 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.54□□□□□ -1.84
EPHA3P29320 HSPE1P5-201ENST00000561489 272 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 MIR4795-201ENST00000584182 89 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AC012119.1-201ENST00000603184 222 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AL121757.2-201ENST00000611223 313 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 uc_338.32-201ENST00000615087 172 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AC103705.1-201ENST00000619013 241 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 AC112484.5-201ENST00000624189 228 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 MTND1P37-201ENST00000636562 264 ntBASIC3.54□□□□□ -1.84
EPHA3P29320 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms