Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH1P12830 AC006020.1-201ENST00000420179 1854 ntBASIC3.13□□□□□ -1.91
CDH1P12830 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.13□□□□□ -1.91
CDH1P12830 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH1P12830 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDH1P12830 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH1P12830 RNU6-451P-201ENST00000362921 107 ntBASIC3.13□□□□□ -1.91
CDH1P12830 RNY3P3-201ENST00000363816 102 ntBASIC3.13□□□□□ -1.91
CDH1P12830 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDH1P12830 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH1P12830 RNU6-877P-201ENST00000383868 107 ntBASIC3.13□□□□□ -1.91
CDH1P12830 RNU6-641P-201ENST00000384006 107 ntBASIC3.13□□□□□ -1.91
CDH1P12830 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CDH1P12830 RPL21P3-201ENST00000395517 478 ntBASIC3.13□□□□□ -1.91
CDH1P12830 TXNP7-201ENST00000406296 293 ntBASIC3.13□□□□□ -1.91
CDH1P12830 ZNF90P2-204ENST00000419323 1075 ntBASIC3.13□□□□□ -1.91
CDH1P12830 RPL30P16-201ENST00000419341 429 ntBASIC3.13□□□□□ -1.91
CDH1P12830 AL109913.1-201ENST00000421173 514 ntBASIC3.13□□□□□ -1.91
CDH1P12830 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH1P12830 AC005300.1-201ENST00000428401 373 ntBASIC3.13□□□□□ -1.91
CDH1P12830 USP12PX-201ENST00000432383 1057 ntBASIC3.13□□□□□ -1.91
CDH1P12830 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH1P12830 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH1P12830 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.13□□□□□ -1.91
CDH1P12830 AC146507.2-201ENST00000460608 476 ntBASIC3.13□□□□□ -1.91
CDH1P12830 MRPS17P3-201ENST00000465453 385 ntBASIC3.13□□□□□ -1.91
CDH1P12830 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH1P12830 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH1P12830 AC117522.1-201ENST00000509821 380 ntBASIC3.13□□□□□ -1.91
CDH1P12830 RNU6-358P-201ENST00000516564 75 ntBASIC3.13□□□□□ -1.91
CDH1P12830 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH1P12830 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH1P12830 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.13□□□□□ -1.91
CDH1P12830 AC024619.4-201ENST00000580924 316 ntBASIC3.13□□□□□ -1.91
CDH1P12830 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.13□□□□□ -1.91
CDH1P12830 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.13□□□□□ -1.91
CDH1P12830 AL354950.2-201ENST00000617939 290 ntBASIC3.13□□□□□ -1.91
CDH1P12830 U6.42-201ENST00000618440 107 ntBASIC3.13□□□□□ -1.91
CDH1P12830 AL360181.4-201ENST00000621752 134 ntBASIC3.13□□□□□ -1.91
CDH1P12830 FRG1KP-201ENST00000623592 341 ntBASIC3.13□□□□□ -1.91
CDH1P12830 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CDH1P12830 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH1P12830 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
CDH1P12830 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH1P12830 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH1P12830 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.12□□□□□ -1.91
CDH1P12830 MTND5P17-201ENST00000418405 1603 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
CDH1P12830 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH1P12830 SMIM11P1-201ENST00000369586 178 ntBASIC3.12□□□□□ -1.91
CDH1P12830 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH1P12830 SNORA36C-201ENST00000384289 132 ntBASIC3.12□□□□□ -1.91
CDH1P12830 RNVU1-14-201ENST00000384770 164 ntBASIC3.12□□□□□ -1.91
CDH1P12830 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.12□□□□□ -1.91
CDH1P12830 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC114491.1-201ENST00000416095 246 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AL139413.1-201ENST00000421309 217 ntBASIC3.12□□□□□ -1.91
CDH1P12830 RAC1P6-201ENST00000423911 575 ntBASIC3.12□□□□□ -1.91
CDH1P12830 SEPT14P3-201ENST00000439401 183 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH1P12830 AL732372.2-207ENST00000445840 183 ntBASIC3.12□□□□□ -1.91
CDH1P12830 SEPT14P2-201ENST00000453405 183 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC006512.1-201ENST00000468816 291 ntBASIC3.12□□□□□ -1.91
CDH1P12830 RN7SL432P-201ENST00000484057 298 ntBASIC3.12□□□□□ -1.91
CDH1P12830 MLLT10P2-201ENST00000506434 249 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.12□□□□□ -1.91
CDH1P12830 SEPT14P4-201ENST00000513445 186 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH1P12830 ERHP1-201ENST00000523006 310 ntBASIC3.12□□□□□ -1.91
CDH1P12830 FO082796.1-201ENST00000523795 183 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC109635.4-202ENST00000531666 412 ntBASIC3.12□□□□□ -1.91
CDH1P12830 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH1P12830 AC093012.1-202ENST00000549403 582 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH1P12830 AC005951.2-201ENST00000576282 495 ntBASIC3.12□□□□□ -1.91
CDH1P12830 MIR4775-201ENST00000581168 75 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC060780.3-201ENST00000589464 80 ntBASIC3.12□□□□□ -1.91
CDH1P12830 BNIP3P30-201ENST00000601184 574 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AL035413.2-201ENST00000604801 525 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC069200.1-201ENST00000609511 323 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AC024940.5-201ENST00000622889 474 ntBASIC3.12□□□□□ -1.91
CDH1P12830 MIR3662-201ENST00000637030 95 ntBASIC3.12□□□□□ -1.91
CDH1P12830 AP001350.1-201ENST00000601906 1524 ntBASIC3.12□□□□□ -1.91
CDH1P12830 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CDH1P12830 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CDH1P12830 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH1P12830 AC110774.1-201ENST00000623567 2018 ntBASIC3.11□□□□□ -1.91
CDH1P12830 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDH1P12830 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDH1P12830 SNORA62.1-201ENST00000364287 154 ntBASIC3.11□□□□□ -1.91
CDH1P12830 RNA5SP72-201ENST00000364442 117 ntBASIC3.11□□□□□ -1.91
CDH1P12830 SNORA7.2-201ENST00000364446 145 ntBASIC3.11□□□□□ -1.91
CDH1P12830 Y_RNA.255-201ENST00000364581 97 ntBASIC3.11□□□□□ -1.91
CDH1P12830 RNU6-867P-201ENST00000364956 107 ntBASIC3.11□□□□□ -1.91
CDH1P12830 RNU6-996P-201ENST00000365438 107 ntBASIC3.11□□□□□ -1.91
CDH1P12830 SNORA24.1-201ENST00000384401 135 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AL357075.1-201ENST00000404107 726 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AL354719.1-201ENST00000406535 843 ntBASIC3.11□□□□□ -1.91
CDH1P12830 AC138393.2-201ENST00000414742 246 ntBASIC3.11□□□□□ -1.91
CDH1P12830 SNRPEP10-201ENST00000420249 274 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms