Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RPS15AP27-201ENST00000449183 343 ntBASIC3.11□□□□□ -1.91
BEST1O76090 GAPDHP17-201ENST00000449858 1001 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.11□□□□□ -1.91
BEST1O76090 AC093899.1-201ENST00000457984 376 ntBASIC3.11□□□□□ -1.91
BEST1O76090 RPS27AP10-201ENST00000496103 208 ntBASIC3.11□□□□□ -1.91
BEST1O76090 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.11□□□□□ -1.91
BEST1O76090 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.11□□□□□ -1.91
BEST1O76090 AC022616.3-201ENST00000523940 148 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.11□□□□□ -1.91
BEST1O76090 AP002453.2-201ENST00000533503 320 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AC106782.4-201ENST00000568264 210 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AC137800.2-201ENST00000574375 120 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.11□□□□□ -1.91
BEST1O76090 OR2AS2P-201ENST00000606902 342 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AC093732.2-201ENST00000607950 274 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AC004832.5-201ENST00000608677 401 ntBASIC3.11□□□□□ -1.91
BEST1O76090 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.11□□□□□ -1.91
BEST1O76090 AC002064.3-201ENST00000623448 346 ntBASIC3.11□□□□□ -1.91
BEST1O76090 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.11□□□□□ -1.91
BEST1O76090 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
BEST1O76090 ELL2P3-201ENST00000457883 1602 ntBASIC3.11□□□□□ -1.91
BEST1O76090 AC000403.1-201ENST00000613696 3585 ntBASIC3.11□□□□□ -1.91
BEST1O76090 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
BEST1O76090 ELF2P3-201ENST00000445099 1506 ntBASIC3.1□□□□□ -1.91
BEST1O76090 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
BEST1O76090 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BEST1O76090 RNU6-188P-201ENST00000364207 107 ntBASIC3.1□□□□□ -1.91
BEST1O76090 RNU6-805P-201ENST00000365643 106 ntBASIC3.1□□□□□ -1.91
BEST1O76090 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.1□□□□□ -1.91
BEST1O76090 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
BEST1O76090 RNU6-190P-201ENST00000384154 102 ntBASIC3.1□□□□□ -1.91
BEST1O76090 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST1O76090 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
BEST1O76090 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.1□□□□□ -1.91
BEST1O76090 AC098614.2-201ENST00000426040 255 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AC022018.1-201ENST00000430685 241 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AL591704.1-201ENST00000432574 275 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AL591212.2-201ENST00000433923 257 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AC104850.1-201ENST00000435940 476 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST1O76090 AC128713.1-201ENST00000471495 306 ntBASIC3.1□□□□□ -1.91
BEST1O76090 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.1□□□□□ -1.91
BEST1O76090 AC113155.1-201ENST00000511141 769 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AC091965.2-201ENST00000512324 613 ntBASIC3.1□□□□□ -1.91
BEST1O76090 RNU6-703P-201ENST00000516946 107 ntBASIC3.1□□□□□ -1.91
BEST1O76090 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
BEST1O76090 AC010620.2-201ENST00000600135 313 ntBASIC3.1□□□□□ -1.91
BEST1O76090 SEPT7P9-203ENST00000604116 343 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AC022893.3-201ENST00000607665 437 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AC013562.2-201ENST00000611632 603 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AL158063.1-201ENST00000615349 536 ntBASIC3.1□□□□□ -1.91
BEST1O76090 AL137790.1-201ENST00000634283 177 ntBASIC3.1□□□□□ -1.91
BEST1O76090 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BEST1O76090 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BEST1O76090 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BEST1O76090 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.1□□□□□ -1.91
BEST1O76090 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.1□□□□□ -1.91
BEST1O76090 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
BEST1O76090 AC138915.1-201ENST00000565427 1685 ntBASIC3.09□□□□□ -1.91
BEST1O76090 RNU6-39P-201ENST00000384344 107 ntBASIC3.09□□□□□ -1.91
BEST1O76090 RNU6-297P-201ENST00000384636 107 ntBASIC3.09□□□□□ -1.91
BEST1O76090 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
BEST1O76090 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC023141.4-201ENST00000412031 328 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST1O76090 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST1O76090 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.09□□□□□ -1.91
BEST1O76090 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST1O76090 AC073614.1-201ENST00000438690 650 ntBASIC3.09□□□□□ -1.91
BEST1O76090 MTND2P4-201ENST00000445034 1004 ntBASIC3.09□□□□□ -1.91
BEST1O76090 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.09□□□□□ -1.91
BEST1O76090 RPS27P29-201ENST00000463110 252 ntBASIC3.09□□□□□ -1.91
BEST1O76090 RPL31P41-201ENST00000477967 372 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC126182.1-201ENST00000478134 357 ntBASIC3.09□□□□□ -1.91
BEST1O76090 RPS15AP34-201ENST00000487776 387 ntBASIC3.09□□□□□ -1.91
BEST1O76090 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC009901.1-201ENST00000506703 541 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST1O76090 Y_RNA.695-201ENST00000516715 107 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC087883.1-201ENST00000551882 391 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.09□□□□□ -1.91
BEST1O76090 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST1O76090 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
BEST1O76090 MIR3167-201ENST00000579623 85 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AL355877.2-201ENST00000603670 358 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC090578.1-201ENST00000604955 591 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC011939.3-201ENST00000613686 466 ntBASIC3.09□□□□□ -1.91
BEST1O76090 Z69908.1-201ENST00000622603 247 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC006386.2-201ENST00000624491 75 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC012005.1-201ENST00000624575 75 ntBASIC3.09□□□□□ -1.91
BEST1O76090 AC110994.2-201ENST00000635481 492 ntBASIC3.09□□□□□ -1.91
BEST1O76090 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
BEST1O76090 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
BEST1O76090 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BEST1O76090 NACAP2-201ENST00000318548 624 ntBASIC3.08□□□□□ -1.92
BEST1O76090 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
BEST1O76090 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST1O76090 SNORA18.3-201ENST00000384122 132 ntBASIC3.08□□□□□ -1.92
BEST1O76090 Y_RNA.534-201ENST00000384599 112 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms