Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNU6-108P-201ENST00000365558 107 ntBASIC3.13□□□□□ -1.91
GPC4O75487 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
GPC4O75487 RNU5A-6P-201ENST00000384136 116 ntBASIC3.13□□□□□ -1.91
GPC4O75487 RNU6-1042P-201ENST00000384204 107 ntBASIC3.13□□□□□ -1.91
GPC4O75487 U3.19-201ENST00000390893 196 ntBASIC3.13□□□□□ -1.91
GPC4O75487 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.13□□□□□ -1.91
GPC4O75487 GSTA9P-201ENST00000406231 611 ntBASIC3.13□□□□□ -1.91
GPC4O75487 RNU4-47P-201ENST00000410876 114 ntBASIC3.13□□□□□ -1.91
GPC4O75487 RNA5SP344-201ENST00000411081 104 ntBASIC3.13□□□□□ -1.91
GPC4O75487 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.13□□□□□ -1.91
GPC4O75487 AC245054.2-201ENST00000415639 319 ntBASIC3.13□□□□□ -1.91
GPC4O75487 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.13□□□□□ -1.91
GPC4O75487 AC099548.1-201ENST00000421443 426 ntBASIC3.13□□□□□ -1.91
GPC4O75487 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.13□□□□□ -1.91
GPC4O75487 HMGB1P27-201ENST00000431429 603 ntBASIC3.13□□□□□ -1.91
GPC4O75487 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
GPC4O75487 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.13□□□□□ -1.91
GPC4O75487 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.13□□□□□ -1.91
GPC4O75487 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.13□□□□□ -1.91
GPC4O75487 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
GPC4O75487 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.13□□□□□ -1.91
GPC4O75487 AC093899.1-201ENST00000457984 376 ntBASIC3.13□□□□□ -1.91
GPC4O75487 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.13□□□□□ -1.91
GPC4O75487 RN7SL807P-201ENST00000470923 297 ntBASIC3.13□□□□□ -1.91
GPC4O75487 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.13□□□□□ -1.91
GPC4O75487 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.13□□□□□ -1.91
GPC4O75487 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
GPC4O75487 AC108078.1-201ENST00000508073 725 ntBASIC3.13□□□□□ -1.91
GPC4O75487 RNA5SP291-201ENST00000517222 105 ntBASIC3.13□□□□□ -1.91
GPC4O75487 RNU6-711P-201ENST00000517255 106 ntBASIC3.13□□□□□ -1.91
GPC4O75487 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.13□□□□□ -1.91
GPC4O75487 MTCYBP20-201ENST00000524239 1129 ntBASIC3.13□□□□□ -1.91
GPC4O75487 AP001646.1-201ENST00000527936 915 ntBASIC3.13□□□□□ -1.91
GPC4O75487 FAM92A1P1-201ENST00000528023 890 ntBASIC3.13□□□□□ -1.91
GPC4O75487 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GPC4O75487 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.13□□□□□ -1.91
GPC4O75487 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.13□□□□□ -1.91
GPC4O75487 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
GPC4O75487 SUB1P2-201ENST00000556401 297 ntBASIC3.13□□□□□ -1.91
GPC4O75487 HMGB1P6-201ENST00000569046 646 ntBASIC3.13□□□□□ -1.91
GPC4O75487 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.13□□□□□ -1.91
GPC4O75487 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.13□□□□□ -1.91
GPC4O75487 AC004805.2-201ENST00000605382 482 ntBASIC3.13□□□□□ -1.91
GPC4O75487 uc_338.25-201ENST00000613756 156 ntBASIC3.13□□□□□ -1.91
GPC4O75487 AL138880.2-201ENST00000616214 239 ntBASIC3.13□□□□□ -1.91
GPC4O75487 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.13□□□□□ -1.91
GPC4O75487 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
GPC4O75487 MAPK10-322ENST00000641485 4530 ntBASIC3.13□□□□□ -1.91
GPC4O75487 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
GPC4O75487 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
GPC4O75487 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GPC4O75487 AL137003.2-201ENST00000606924 2538 ntBASIC3.13□□□□□ -1.91
GPC4O75487 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GPC4O75487 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GPC4O75487 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.12□□□□□ -1.91
GPC4O75487 SNORA70.4-201ENST00000365509 134 ntBASIC3.12□□□□□ -1.91
GPC4O75487 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
GPC4O75487 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.12□□□□□ -1.91
GPC4O75487 SNORA46-201ENST00000384762 135 ntBASIC3.12□□□□□ -1.91
GPC4O75487 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
GPC4O75487 RNU6-817P-201ENST00000391083 104 ntBASIC3.12□□□□□ -1.91
GPC4O75487 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.12□□□□□ -1.91
GPC4O75487 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GPC4O75487 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.12□□□□□ -1.91
GPC4O75487 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.12□□□□□ -1.91
GPC4O75487 ISCA1P1-201ENST00000426679 387 ntBASIC3.12□□□□□ -1.91
GPC4O75487 ZNF863P-201ENST00000426746 417 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AL592045.1-201ENST00000429867 352 ntBASIC3.12□□□□□ -1.91
GPC4O75487 FABP5P15-201ENST00000453566 214 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AL031183.1-201ENST00000457667 207 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AC126389.1-201ENST00000477436 290 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AC109925.1-201ENST00000478069 331 ntBASIC3.12□□□□□ -1.91
GPC4O75487 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.12□□□□□ -1.91
GPC4O75487 RPL39P36-201ENST00000490784 156 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AC117522.1-201ENST00000509821 380 ntBASIC3.12□□□□□ -1.91
GPC4O75487 RNU6-410P-201ENST00000517006 107 ntBASIC3.12□□□□□ -1.91
GPC4O75487 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.12□□□□□ -1.91
GPC4O75487 AC010653.1-201ENST00000571108 881 ntBASIC3.12□□□□□ -1.91
GPC4O75487 MIR5680-201ENST00000577577 84 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.12□□□□□ -1.91
GPC4O75487 AL391646.1-201ENST00000603860 190 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AC025449.1-201ENST00000603896 529 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AL136363.2-201ENST00000604173 851 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AC007179.3-201ENST00000604976 235 ntBASIC3.12□□□□□ -1.91
GPC4O75487 AC022893.3-201ENST00000607665 437 ntBASIC3.12□□□□□ -1.91
GPC4O75487 FTX_3.1-201ENST00000610451 147 ntBASIC3.12□□□□□ -1.91
GPC4O75487 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GPC4O75487 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.12□□□□□ -1.91
GPC4O75487 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
GPC4O75487 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.12□□□□□ -1.91
GPC4O75487 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
GPC4O75487 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GPC4O75487 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.11□□□□□ -1.91
GPC4O75487 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.11□□□□□ -1.91
GPC4O75487 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.11□□□□□ -1.91
GPC4O75487 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
GPC4O75487 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
GPC4O75487 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.11□□□□□ -1.91
GPC4O75487 RNU6-1097P-201ENST00000363586 107 ntBASIC3.11□□□□□ -1.91
GPC4O75487 Y_RNA.296-201ENST00000364930 108 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms