Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MIR6875-201ENST00000617506 72 ntBASIC3.77□□□□□ -1.81
PROM1O43490 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PROM1O43490 AL359757.2-201ENST00000624309 274 ntBASIC3.77□□□□□ -1.81
PROM1O43490 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.77□□□□□ -1.81
PROM1O43490 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.77□□□□□ -1.81
PROM1O43490 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PROM1O43490 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PROM1O43490 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PROM1O43490 AC002546.1-201ENST00000588041 2504 ntBASIC3.77□□□□□ -1.81
PROM1O43490 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PROM1O43490 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.77□□□□□ -1.81
PROM1O43490 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.77□□□□□ -1.81
PROM1O43490 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.76□□□□□ -1.81
PROM1O43490 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PROM1O43490 MIR369-201ENST00000362155 70 ntBASIC3.76□□□□□ -1.81
PROM1O43490 RNA5SP295-201ENST00000362655 121 ntBASIC3.76□□□□□ -1.81
PROM1O43490 Y_RNA.167-201ENST00000363735 109 ntBASIC3.76□□□□□ -1.81
PROM1O43490 RNU6-82P-201ENST00000363970 107 ntBASIC3.76□□□□□ -1.81
PROM1O43490 RNA5SP399-201ENST00000364003 117 ntBASIC3.76□□□□□ -1.81
PROM1O43490 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PROM1O43490 RNU6-43P-201ENST00000384302 107 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AC110754.1-201ENST00000399740 601 ntBASIC3.76□□□□□ -1.81
PROM1O43490 RNU4-14P-201ENST00000410858 122 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AC074085.1-201ENST00000413598 418 ntBASIC3.76□□□□□ -1.81
PROM1O43490 MTND2P23-201ENST00000422990 651 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.76□□□□□ -1.81
PROM1O43490 AC011742.1-201ENST00000431448 434 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AC007389.2-201ENST00000434630 306 ntBASIC3.76□□□□□ -1.81
PROM1O43490 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.76□□□□□ -1.81
PROM1O43490 TBCAP1-201ENST00000436520 327 ntBASIC3.76□□□□□ -1.81
PROM1O43490 HMGB1P37-201ENST00000439613 609 ntBASIC3.76□□□□□ -1.81
PROM1O43490 NEFMP1-201ENST00000443423 1006 ntBASIC3.76□□□□□ -1.81
PROM1O43490 RPS15AP27-201ENST00000449183 343 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.76□□□□□ -1.81
PROM1O43490 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.76□□□□□ -1.81
PROM1O43490 AC096576.1-201ENST00000489014 359 ntBASIC3.76□□□□□ -1.81
PROM1O43490 KLHL2P1-201ENST00000508691 521 ntBASIC3.76□□□□□ -1.81
PROM1O43490 TBCAP3-201ENST00000512475 312 ntBASIC3.76□□□□□ -1.81
PROM1O43490 RNU6-189P-201ENST00000516120 101 ntBASIC3.76□□□□□ -1.81
PROM1O43490 RN7SKP289-201ENST00000517244 295 ntBASIC3.76□□□□□ -1.81
PROM1O43490 IGKV2-23-201ENST00000518729 323 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AC090136.1-201ENST00000520009 240 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.76□□□□□ -1.81
PROM1O43490 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.76□□□□□ -1.81
PROM1O43490 MIR4644-201ENST00000579929 84 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AC244505.7-201ENST00000599675 272 ntBASIC3.76□□□□□ -1.81
PROM1O43490 ATP1B3P1-201ENST00000605365 821 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AC080078.3-201ENST00000605407 463 ntBASIC3.76□□□□□ -1.81
PROM1O43490 AL627309.6-201ENST00000606857 840 ntBASIC3.76□□□□□ -1.81
PROM1O43490 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PROM1O43490 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PROM1O43490 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.76□□□□□ -1.81
PROM1O43490 HSPA8P1-201ENST00000425843 1833 ntBASIC3.76□□□□□ -1.81
PROM1O43490 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
PROM1O43490 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PROM1O43490 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.76□□□□□ -1.81
PROM1O43490 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PROM1O43490 AC121333.1-201ENST00000567488 2709 ntBASIC3.75□□□□□ -1.81
PROM1O43490 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PROM1O43490 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.75□□□□□ -1.81
PROM1O43490 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PROM1O43490 SNORA71.3-201ENST00000362582 128 ntBASIC3.75□□□□□ -1.81
PROM1O43490 Y_RNA.333-201ENST00000365274 102 ntBASIC3.75□□□□□ -1.81
PROM1O43490 RNU6-190P-201ENST00000384154 102 ntBASIC3.75□□□□□ -1.81
PROM1O43490 SNORD3H-201ENST00000384486 214 ntBASIC3.75□□□□□ -1.81
PROM1O43490 RNU6-1127P-201ENST00000384580 107 ntBASIC3.75□□□□□ -1.81
PROM1O43490 MIR200C-201ENST00000384980 68 ntBASIC3.75□□□□□ -1.81
PROM1O43490 EIF4E2P1-201ENST00000393781 255 ntBASIC3.75□□□□□ -1.81
PROM1O43490 MIR548P-201ENST00000408336 84 ntBASIC3.75□□□□□ -1.81
PROM1O43490 RPL37P10-201ENST00000412884 288 ntBASIC3.75□□□□□ -1.81
PROM1O43490 RPL7AP73-201ENST00000413490 353 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AL691449.1-201ENST00000426570 421 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.75□□□□□ -1.81
PROM1O43490 AC090774.1-201ENST00000435925 246 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AC083863.1-201ENST00000438811 231 ntBASIC3.75□□□□□ -1.81
PROM1O43490 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.75□□□□□ -1.81
PROM1O43490 AC012181.1-201ENST00000479895 423 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AC027575.1-201ENST00000481064 460 ntBASIC3.75□□□□□ -1.81
PROM1O43490 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.75□□□□□ -1.81
PROM1O43490 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.75□□□□□ -1.81
PROM1O43490 HIGD1AP13-201ENST00000509878 289 ntBASIC3.75□□□□□ -1.81
PROM1O43490 RN7SKP24-201ENST00000515888 284 ntBASIC3.75□□□□□ -1.81
PROM1O43490 RNU6-327P-201ENST00000516270 127 ntBASIC3.75□□□□□ -1.81
PROM1O43490 RNA5SP468-201ENST00000516782 93 ntBASIC3.75□□□□□ -1.81
PROM1O43490 RNU6-685P-201ENST00000517088 95 ntBASIC3.75□□□□□ -1.81
PROM1O43490 Y_RNA.718-201ENST00000517110 102 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AC008489.1-201ENST00000524271 483 ntBASIC3.75□□□□□ -1.81
PROM1O43490 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
PROM1O43490 YPEL5P3-201ENST00000547227 352 ntBASIC3.75□□□□□ -1.81
PROM1O43490 SYF2P1-201ENST00000550658 413 ntBASIC3.75□□□□□ -1.81
PROM1O43490 OR11H5P-201ENST00000554039 926 ntBASIC3.75□□□□□ -1.81
PROM1O43490 OR4H12P-201ENST00000556269 907 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AC020661.2-201ENST00000560114 134 ntBASIC3.75□□□□□ -1.81
PROM1O43490 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.75□□□□□ -1.81
PROM1O43490 MIR3944-201ENST00000581277 108 ntBASIC3.75□□□□□ -1.81
PROM1O43490 AC053481.4-201ENST00000583164 216 ntBASIC3.75□□□□□ -1.81
PROM1O43490 MIR3171-201ENST00000584270 74 ntBASIC3.75□□□□□ -1.81
PROM1O43490 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.75□□□□□ -1.81
PROM1O43490 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.75□□□□□ -1.81
PROM1O43490 AC008739.3-201ENST00000603262 127 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms