Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC025263.3-201ENST00000622965 1396 ntBASIC1.41□□□□□ -2.18
CHD1O14646 AL139397.2-201ENST00000404529 772 ntBASIC1.41□□□□□ -2.18
CHD1O14646 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.41□□□□□ -2.18
CHD1O14646 AL356320.2-201ENST00000417263 507 ntBASIC1.41□□□□□ -2.18
CHD1O14646 MTCYBP23-201ENST00000558717 1102 ntBASIC1.41□□□□□ -2.18
CHD1O14646 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.41□□□□□ -2.18
CHD1O14646 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.41□□□□□ -2.18
CHD1O14646 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.41□□□□□ -2.18
CHD1O14646 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.41□□□□□ -2.18
CHD1O14646 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHD1O14646 RNU6-1249P-201ENST00000363237 111 ntBASIC1.4□□□□□ -2.18
CHD1O14646 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CHD1O14646 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.4□□□□□ -2.18
CHD1O14646 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.4□□□□□ -2.18
CHD1O14646 AC055731.1-201ENST00000474387 401 ntBASIC1.4□□□□□ -2.18
CHD1O14646 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.18
CHD1O14646 Y_RNA.62-201ENST00000362840 99 ntBASIC1.4□□□□□ -2.19
CHD1O14646 VN1R36P-201ENST00000414936 291 ntBASIC1.4□□□□□ -2.19
CHD1O14646 RPL21P90-201ENST00000415692 466 ntBASIC1.4□□□□□ -2.19
CHD1O14646 RPS27P26-201ENST00000494583 239 ntBASIC1.4□□□□□ -2.19
CHD1O14646 RNU2-19P-201ENST00000517288 84 ntBASIC1.4□□□□□ -2.19
CHD1O14646 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.4□□□□□ -2.19
CHD1O14646 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CHD1O14646 AC087481.2-201ENST00000565492 330 ntBASIC1.4□□□□□ -2.19
CHD1O14646 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.4□□□□□ -2.19
CHD1O14646 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHD1O14646 AP003072.5-201ENST00000623872 773 ntBASIC1.4□□□□□ -2.19
CHD1O14646 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.4□□□□□ -2.19
CHD1O14646 CR848007.1-201ENST00000442354 1699 ntBASIC1.39□□□□□ -2.19
CHD1O14646 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CHD1O14646 RNA5SP450-201ENST00000411206 102 ntBASIC1.39□□□□□ -2.19
CHD1O14646 AL133384.1-201ENST00000412744 351 ntBASIC1.39□□□□□ -2.19
CHD1O14646 MTCO3P4-201ENST00000419236 787 ntBASIC1.39□□□□□ -2.19
CHD1O14646 MTCO3P46-201ENST00000425787 232 ntBASIC1.39□□□□□ -2.19
CHD1O14646 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.39□□□□□ -2.19
CHD1O14646 AC118469.1-201ENST00000442943 488 ntBASIC1.39□□□□□ -2.19
CHD1O14646 BUD31P2-201ENST00000449374 300 ntBASIC1.39□□□□□ -2.19
CHD1O14646 DYNLL1P5-201ENST00000467158 270 ntBASIC1.39□□□□□ -2.19
CHD1O14646 PCNAP1-201ENST00000505363 709 ntBASIC1.39□□□□□ -2.19
CHD1O14646 AC104229.1-201ENST00000561364 255 ntBASIC1.39□□□□□ -2.19
CHD1O14646 XIAPP1-201ENST00000603162 600 ntBASIC1.39□□□□□ -2.19
CHD1O14646 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.39□□□□□ -2.19
CHD1O14646 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.38□□□□□ -2.19
CHD1O14646 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.38□□□□□ -2.19
CHD1O14646 AC244035.1-201ENST00000430042 390 ntBASIC1.38□□□□□ -2.19
CHD1O14646 AC004383.1-201ENST00000438135 289 ntBASIC1.38□□□□□ -2.19
CHD1O14646 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.38□□□□□ -2.19
CHD1O14646 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.38□□□□□ -2.19
CHD1O14646 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.38□□□□□ -2.19
CHD1O14646 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CHD1O14646 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.38□□□□□ -2.19
CHD1O14646 AC106900.2-201ENST00000604994 317 ntBASIC1.38□□□□□ -2.19
CHD1O14646 AL050343.2-201ENST00000607338 280 ntBASIC1.38□□□□□ -2.19
CHD1O14646 AC091304.6-201ENST00000619761 202 ntBASIC1.38□□□□□ -2.19
CHD1O14646 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CHD1O14646 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CHD1O14646 OR4G2P-201ENST00000328113 903 ntBASIC1.37□□□□□ -2.19
CHD1O14646 U8.14-201ENST00000390843 143 ntBASIC1.37□□□□□ -2.19
CHD1O14646 AC092648.1-201ENST00000425870 423 ntBASIC1.37□□□□□ -2.19
CHD1O14646 RPS15AP27-201ENST00000449183 343 ntBASIC1.37□□□□□ -2.19
CHD1O14646 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
CHD1O14646 AC107032.1-201ENST00000485945 480 ntBASIC1.37□□□□□ -2.19
CHD1O14646 KATNBL1P4-201ENST00000503545 918 ntBASIC1.37□□□□□ -2.19
CHD1O14646 COL6A4P2-205ENST00000509855 506 ntBASIC1.37□□□□□ -2.19
CHD1O14646 CYCSP23-201ENST00000519781 313 ntBASIC1.37□□□□□ -2.19
CHD1O14646 AP001330.4-201ENST00000604350 154 ntBASIC1.37□□□□□ -2.19
CHD1O14646 AL137003.2-201ENST00000606924 2538 ntBASIC1.37□□□□□ -2.19
CHD1O14646 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CHD1O14646 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.37□□□□□ -2.19
CHD1O14646 HMGN2P10-201ENST00000448085 265 ntBASIC1.37□□□□□ -2.19
CHD1O14646 snoU13.28-201ENST00000459235 104 ntBASIC1.37□□□□□ -2.19
CHD1O14646 AC005410.1-202ENST00000460347 485 ntBASIC1.37□□□□□ -2.19
CHD1O14646 SNORA31.25-201ENST00000517242 134 ntBASIC1.37□□□□□ -2.19
CHD1O14646 ZNF92P3-201ENST00000596594 954 ntBASIC1.37□□□□□ -2.19
CHD1O14646 AC005034.5-201ENST00000604219 466 ntBASIC1.37□□□□□ -2.19
CHD1O14646 AC079395.3-201ENST00000615161 484 ntBASIC1.37□□□□□ -2.19
CHD1O14646 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CHD1O14646 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.36□□□□□ -2.19
CHD1O14646 Y_RNA.294-201ENST00000364916 102 ntBASIC1.36□□□□□ -2.19
CHD1O14646 VTRNA1-3-201ENST00000365645 89 ntBASIC1.36□□□□□ -2.19
CHD1O14646 MIR767-201ENST00000390228 109 ntBASIC1.36□□□□□ -2.19
CHD1O14646 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.36□□□□□ -2.19
CHD1O14646 AL353689.1-201ENST00000438895 199 ntBASIC1.36□□□□□ -2.19
CHD1O14646 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.36□□□□□ -2.19
CHD1O14646 HSPE1P24-201ENST00000450782 238 ntBASIC1.36□□□□□ -2.19
CHD1O14646 RPL23AP3-201ENST00000453844 468 ntBASIC1.36□□□□□ -2.19
CHD1O14646 SNORD97-201ENST00000459187 142 ntBASIC1.36□□□□□ -2.19
CHD1O14646 AC087884.1-201ENST00000469738 328 ntBASIC1.36□□□□□ -2.19
CHD1O14646 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.36□□□□□ -2.19
CHD1O14646 NDUFB4P2-201ENST00000509515 391 ntBASIC1.36□□□□□ -2.19
CHD1O14646 AC091965.2-201ENST00000512324 613 ntBASIC1.36□□□□□ -2.19
CHD1O14646 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.36□□□□□ -2.19
CHD1O14646 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.36□□□□□ -2.19
CHD1O14646 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.36□□□□□ -2.19
CHD1O14646 AC074029.2-201ENST00000551045 634 ntBASIC1.36□□□□□ -2.19
CHD1O14646 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.36□□□□□ -2.19
CHD1O14646 AC005786.1-201ENST00000588553 154 ntBASIC1.36□□□□□ -2.19
CHD1O14646 AC025165.5-201ENST00000602802 578 ntBASIC1.36□□□□□ -2.19
CHD1O14646 AL031775.1-201ENST00000607014 887 ntBASIC1.36□□□□□ -2.19
CHD1O14646 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms