Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC113139.1-201ENST00000605049 239 ntBASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 U2.17-201ENST00000611454 95 ntBASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC103705.1-201ENST00000619013 241 ntBASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 AL160413.1-201ENST00000622780 310 ntBASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 MFSD8-236ENST00000641509 4050 ntBASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRBV5-3A0A0A0MS03 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 MTND4P23-201ENST00000447723 1363 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 RNU6-715P-201ENST00000365204 103 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 Y_RNA.419-201ENST00000384041 102 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 U8.11-201ENST00000384699 133 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 U8.12-201ENST00000384701 133 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 SNORA16.2-201ENST00000390991 127 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AL513331.1-201ENST00000411908 397 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC080125.1-201ENST00000414888 684 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 DBIP2-201ENST00000419076 262 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 BX842559.1-201ENST00000419615 532 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 RPL23AP31-201ENST00000456160 467 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 HMGB3P30-201ENST00000457863 606 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 Y_RNA.632-201ENST00000459189 102 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 U8.18-201ENST00000459285 133 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 DYNLL1P5-201ENST00000467158 270 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 MTND4P17-201ENST00000470444 350 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 Y_RNA.682-201ENST00000516457 100 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 Vault.1-201ENST00000516474 102 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 SNORA70.19-201ENST00000516717 90 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AP000889.2-201ENST00000532684 490 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 AP001330.4-201ENST00000604350 154 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 HSPA8P4-201ENST00000511877 1920 ntBASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
TRBV5-3A0A0A0MS03 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC007823.1-201ENST00000569932 1566 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 RPL32P3-201ENST00000359025 275 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 SNORD9-201ENST00000362566 104 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 Y_RNA.387-201ENST00000383918 102 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 Y_RNA.399-201ENST00000383955 105 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 Y_RNA.431-201ENST00000384086 102 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 RNU6-434P-201ENST00000384376 107 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 MIR514A1-201ENST00000385133 98 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 RN7SKP156-201ENST00000410308 342 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 RAB28P1-201ENST00000411517 641 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 AL160275.3-201ENST00000423876 471 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 RPL23AP82-202ENST00000427528 469 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 USP9YP7-201ENST00000436723 430 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 USP9YP32-201ENST00000452432 430 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 snoU13.4-201ENST00000458916 104 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 CENPBD1P1-201ENST00000464061 469 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 RNU6-927P-201ENST00000516199 100 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 RNU6-1088P-201ENST00000516850 104 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 MED28P6-201ENST00000558776 231 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 ATP1B3P1-201ENST00000605365 821 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 MIR15A-201ENST00000607334 83 ntBASIC3.29□□□□□ -1.88
TRBV5-3A0A0A0MS03 AL355810.1-201ENST00000614629 552 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms