Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 AL023881.1-201ENST00000621088 301 ntBASIC4.48□□□□□ -1.69
SNX11Q9Y5W9 DHX9P1-201ENST00000436565 3076 ntBASIC4.48□□□□□ -1.69
SNX11Q9Y5W9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SNX11Q9Y5W9 EOGT-210ENST00000615922 1931 ntBASIC4.48□□□□□ -1.69
SNX11Q9Y5W9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SNX11Q9Y5W9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.48□□□□□ -1.69
SNX11Q9Y5W9 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AC010329.2-201ENST00000595195 2737 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 SAMMSON-213ENST00000641336 1521 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 SAGE4P-201ENST00000442271 3381 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AP000542.2-201ENST00000623199 6179 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AL391684.1-202ENST00000641293 1636 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 RNU1-83P-201ENST00000363426 164 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 Y_RNA.324-201ENST00000365165 102 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 MIR548I2-201ENST00000408348 149 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 EIF4EP2-201ENST00000422816 654 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 HMGB1P27-201ENST00000431429 603 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 RPS26P2-201ENST00000440331 348 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 RANP8-201ENST00000444720 713 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 PRDX3P3-201ENST00000447765 522 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 RPL23AP2-201ENST00000471227 466 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 UQCRHP4-201ENST00000471686 272 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AC010683.1-201ENST00000473673 378 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AC091167.1-201ENST00000492017 396 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 MIR2116-201ENST00000517221 80 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AC083843.3-201ENST00000623679 2186 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 AP001273.1-201ENST00000624493 3152 ntBASIC4.47□□□□□ -1.69
SNX11Q9Y5W9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SNX11Q9Y5W9 AP000560.1-201ENST00000624150 1937 ntBASIC4.46□□□□□ -1.69
SNX11Q9Y5W9 RLIMP1-201ENST00000339626 1680 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 RNU6-1317P-201ENST00000364582 104 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 Y_RNA.269-201ENST00000364685 89 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 U8.8-201ENST00000365399 135 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 RNU1-64P-201ENST00000365443 163 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 RNU6-1179P-201ENST00000384667 107 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 RNU6-700P-201ENST00000391043 107 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 SNORA48.7-201ENST00000391302 135 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AL080315.1-201ENST00000406055 466 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 RNA5SP56-201ENST00000410277 118 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 RNU6-607P-201ENST00000411283 108 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 PPP1R11P2-201ENST00000423543 382 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AL159987.2-201ENST00000432754 307 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 RPL37P6-202ENST00000464216 403 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 SNORA31.3-201ENST00000516029 96 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AP000859.1-201ENST00000525536 307 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC126177.3-201ENST00000551839 688 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC005951.2-201ENST00000576282 495 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 RN7SL176P-201ENST00000580352 264 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 MIR548AC-201ENST00000585049 88 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC123912.5-201ENST00000605470 343 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 AC127459.3-201ENST00000624328 466 ntBASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SNX11Q9Y5W9 Z75746.1-201ENST00000440243 2080 ntBASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 AC005183.1-201ENST00000603687 1979 ntBASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 DDX18P3-201ENST00000404856 2007 ntBASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 AC009229.4-201ENST00000623854 1947 ntBASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 RPL9P7-201ENST00000330965 580 ntBASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 RNU1-76P-201ENST00000362903 159 ntBASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 snoU2_19.2-201ENST00000363024 80 ntBASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 RNA5SP366-201ENST00000365454 123 ntBASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.45□□□□□ -1.7
SNX11Q9Y5W9 MIR521-1-201ENST00000384902 87 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms