Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 RNU7-51P-201ENST00000516560 62 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 NRON-201ENST00000517270 370 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 MIR3921-201ENST00000577308 85 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 Z84480.1-201ENST00000605131 311 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AP002360.4-201ENST00000606980 481 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 AL136164.4-201ENST00000625013 2135 ntBASIC3.14□□□□□ -1.91
YIPF1Q9Y548 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
YIPF1Q9Y548 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 HSPE1P11-201ENST00000339579 310 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 MIR493-201ENST00000385254 89 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 NDUFS5P1-201ENST00000405668 289 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 U3.42-201ENST00000408746 214 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 Y_RNA.619-201ENST00000410951 90 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 RPL27AP8-201ENST00000424277 446 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 HMGN2P20-201ENST00000437531 273 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 SNORD97-201ENST00000459187 142 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC007182.2-201ENST00000489251 402 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC023194.1-201ENST00000493084 308 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC010493.1-201ENST00000513479 292 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 SCGB1D5P-201ENST00000515134 247 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC104027.1-201ENST00000521887 300 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 SUB1P2-201ENST00000556401 297 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC098848.2-201ENST00000588023 330 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AF250324.2-201ENST00000608299 610 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 AC007318.2-201ENST00000620999 243 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 MIR6863-201ENST00000636112 90 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 SDAD1P2-201ENST00000441308 2028 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.13□□□□□ -1.91
YIPF1Q9Y548 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
YIPF1Q9Y548 MTND4P5-201ENST00000435821 1374 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 Y_RNA.22-201ENST00000362492 102 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 MIR558-201ENST00000384920 94 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 RPL32P35-201ENST00000415214 394 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 RPL31P12-201ENST00000422587 358 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 RAC1P6-201ENST00000423911 575 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 GPR143P-201ENST00000434155 205 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC020550.1-201ENST00000447385 163 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 RPL37P4-201ENST00000448908 268 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC012181.1-201ENST00000479895 423 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 HMGB1P29-201ENST00000505659 499 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 RNA5SP356-201ENST00000515972 94 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 OR5G4P-201ENST00000525251 760 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 RPL23AP84-201ENST00000571193 464 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AL121992.2-201ENST00000606262 256 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AL110115.1-201ENST00000614396 364 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC090132.2-201ENST00000615881 347 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AL589994.2-201ENST00000621124 579 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC092628.2-201ENST00000622492 339 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC007998.5-201ENST00000622938 237 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 FRG1KP-201ENST00000623592 341 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 AC124864.2-201ENST00000624736 186 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 OR5H6-203ENST00000642105 978 ntBASIC3.12□□□□□ -1.91
YIPF1Q9Y548 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
YIPF1Q9Y548 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms