Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 COX6CP5-201ENST00000527162 228 ntBASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 AP001646.1-201ENST00000527936 915 ntBASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 AC023050.2-201ENST00000544968 387 ntBASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 MIR3124-201ENST00000582636 67 ntBASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 CR381653.2-201ENST00000624041 768 ntBASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 AC007490.1-201ENST00000624321 703 ntBASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 MTND5P29-201ENST00000458676 1807 ntBASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NPIPA1Q9UND3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 UBE2L2-201ENST00000254302 429 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 U8.14-201ENST00000390843 143 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 NDUFS5P1-201ENST00000405668 289 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 RPL17P12-201ENST00000413391 526 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 RPL22P18-201ENST00000417197 377 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 Z80107.1-201ENST00000436830 412 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 RPS15AP7-201ENST00000439294 405 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 ELOCP31-201ENST00000540463 467 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 ELOCP32-201ENST00000548625 324 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 MIR3945-201ENST00000581853 98 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 MIR4635-201ENST00000583759 79 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 AL161798.1-201ENST00000604630 131 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NPIPA1Q9UND3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AL391994.1-201ENST00000254724 282 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 RNU6-701P-201ENST00000384059 107 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 RNU2-68P-201ENST00000410878 191 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC104651.1-201ENST00000427559 735 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 MED14P1-201ENST00000430517 648 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC092427.1-202ENST00000430569 476 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 HMGB1P27-201ENST00000431429 603 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 MYL8P-204ENST00000431574 518 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 GPM6BP2-201ENST00000432046 144 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 TIMM9P1-201ENST00000436122 256 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 GPM6BP1-201ENST00000446387 144 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC107626.1-201ENST00000471084 183 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC126182.1-201ENST00000478134 357 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 RPS27AP10-201ENST00000496103 208 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 RPF2P2-201ENST00000504693 896 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AP003461.1-201ENST00000528866 78 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC091544.4-201ENST00000555268 342 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AL359212.1-201ENST00000556608 614 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AL356432.3-201ENST00000568952 465 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AP001981.2-201ENST00000603241 418 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AP000811.1-201ENST00000603803 651 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 AC034102.8-201ENST00000615146 484 ntBASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NPIPA1Q9UND3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NPIPA1Q9UND3 AC135776.4-201ENST00000624300 1904 ntBASIC2.39□□□□□ -2.03
NPIPA1Q9UND3 SNORD62.1-201ENST00000362541 86 ntBASIC2.39□□□□□ -2.03
NPIPA1Q9UND3 Y_RNA.46-201ENST00000362695 102 ntBASIC2.39□□□□□ -2.03
NPIPA1Q9UND3 RNU6-1214P-201ENST00000363650 109 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms