Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC015813.4-201ENST00000610469 179 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 MIR7111-201ENST00000619751 72 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC078938.1-201ENST00000620993 318 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 MIR4727-201ENST00000622232 55 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 AC105074.1-201ENST00000623380 3095 ntBASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.75□□□□□ -1.97
NOTCH3Q9UM47 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 SRP72P2-201ENST00000344851 1979 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 U3.12-201ENST00000364498 214 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.463-201ENST00000384271 102 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.485-201ENST00000384395 102 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.646-201ENST00000410980 101 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC092832.1-201ENST00000422934 400 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC137499.1-201ENST00000427602 88 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 HMGB3P11-201ENST00000440127 604 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 DYNLT3P2-201ENST00000442517 295 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RPL23AP11-201ENST00000475260 469 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC097462.2-201ENST00000504623 481 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.661-201ENST00000516003 99 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RNU6-976P-201ENST00000516086 111 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RNU6-1220P-201ENST00000517126 108 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 FTH1P11-201ENST00000517577 551 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC022616.6-201ENST00000520479 119 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 OR4R1P-201ENST00000529879 463 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC109635.4-202ENST00000531666 412 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 MIR5680-201ENST00000577577 84 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 MIR3945-201ENST00000581853 98 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC137590.2-201ENST00000619709 240 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 CROT-204ENST00000442291 1993 ntTSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 ASNSP3-201ENST00000451989 1306 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AL157777.2-201ENST00000258070 137 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RNU6-996P-201ENST00000365438 107 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RNU6-1040P-201ENST00000383974 107 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.414-201ENST00000384011 101 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RNU6-190P-201ENST00000384154 102 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.455-201ENST00000384230 98 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RNU6-1151P-201ENST00000384684 107 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RPL31P52-201ENST00000407532 367 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 MIR548K-201ENST00000408406 116 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC087650.1-201ENST00000431445 468 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC093156.1-201ENST00000440382 670 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 HMGB3P22-202ENST00000451823 572 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RPL30P15-201ENST00000457129 321 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC114801.2-201ENST00000503825 781 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 IGKV2D-23-201ENST00000518179 286 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 FAM106CP-201ENST00000582212 507 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AL365440.1-201ENST00000436135 2167 ntBASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
NOTCH3Q9UM47 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms