Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 RPL23AP29-201ENST00000397284 453 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 MIR888-201ENST00000401186 77 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AL079342.1-201ENST00000401460 267 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 RNU6-1328P-201ENST00000410938 106 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 RNU6-516P-201ENST00000411381 104 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 USP9YP27-201ENST00000418455 438 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 TIMM9P2-201ENST00000419324 266 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AL451054.2-201ENST00000420896 202 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 Z98742.2-201ENST00000431564 187 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 MTND1P31-201ENST00000449206 961 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 MTND1P9-201ENST00000453775 944 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 ANKRD26P4-201ENST00000455755 950 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 HMGN2P23-201ENST00000456759 269 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AC113347.3-201ENST00000509113 148 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AC116337.1-201ENST00000509680 687 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 SCARNA11.3-201ENST00000517276 130 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 DEFB131D-201ENST00000526803 184 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 MTND3P13-201ENST00000574391 343 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 MIR5002-201ENST00000584713 97 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 SNORD14A-201ENST00000606526 91 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 OR10AB1P-201ENST00000609613 938 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 RNU6-1192P-201ENST00000612197 107 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AL138478.1-201ENST00000612252 832 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AC010133.1-201ENST00000615809 842 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 RNU6-489P-201ENST00000618289 107 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AC123767.1-202ENST00000620407 817 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AC009268.2-201ENST00000621925 457 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 OR1S1-201ENST00000624470 978 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 AC019226.1-201ENST00000625666 515 ntBASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.74□□□□□ -2.13
RPUSD1Q9UJJ7 MTND4P35-201ENST00000604257 1375 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 CKAP2P1-201ENST00000555477 2049 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 RNA5SP37-201ENST00000365420 130 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 SNORA67.3-201ENST00000384366 140 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 RNU6-298P-201ENST00000390888 96 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 RNU6-754P-201ENST00000391166 107 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AL356421.1-201ENST00000403255 413 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AL023284.1-201ENST00000403956 276 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 SNORD23.1-201ENST00000408212 104 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 HMGB1P49-201ENST00000418882 569 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 USP12PX-201ENST00000432383 1057 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 RPL23AP76-201ENST00000441860 458 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 TRBV1-201ENST00000476502 284 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AC068587.2-201ENST00000478386 781 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 HMGB1P36-201ENST00000487709 576 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AC008837.2-201ENST00000513076 418 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 CYCSP2-201ENST00000558168 301 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AL512347.1-201ENST00000566420 503 ntBASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
RPUSD1Q9UJJ7 AC011477.1-204ENST00000623416 1325 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 RNU6-750P-201ENST00000390946 107 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 TXNP7-201ENST00000406296 293 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 MTND1P23-201ENST00000416931 372 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 COX7BP2-201ENST00000437976 242 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AL591719.1-201ENST00000444669 744 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 RPS27P21-201ENST00000486977 252 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 GTF2IP9-201ENST00000502460 301 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AC098591.2-201ENST00000510152 315 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 RNU5F-8P-201ENST00000515941 111 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 RNU6-467P-201ENST00000517027 110 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 HMGN1P28-201ENST00000521340 364 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms