Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 BMS1P22-201ENST00000414726 313 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AL451074.5-201ENST00000415894 435 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 MRPL50P2-201ENST00000416821 482 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC099548.1-201ENST00000421443 426 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 ISCA1P1-201ENST00000426679 387 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 TRIAP1P1-201ENST00000427062 225 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 ELOCP14-201ENST00000428070 331 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 GPR143P-201ENST00000434155 205 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 RPL36AP6-201ENST00000435770 321 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 ELOCP7-201ENST00000439968 331 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 MTND4P25-201ENST00000441039 533 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 DDX3P2-201ENST00000446138 111 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 snoU13.28-201ENST00000459235 104 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC026427.2-201ENST00000506228 536 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 RNU6-405P-201ENST00000516637 110 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 SNORA67.7-201ENST00000516664 135 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 RNU6-677P-201ENST00000516914 101 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 RNU6-410P-201ENST00000517006 107 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AP003072.2-201ENST00000527756 676 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 MTND1P15-201ENST00000579262 949 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC245389.1-201ENST00000605141 529 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC068880.5-201ENST00000624331 290 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 U6.105-201ENST00000637379 88 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 LRRC77P-213ENST00000637727 880 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AC233263.6-201ENST00000631132 1963 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 MAPK10-362ENST00000641864 4484 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 MTND5P29-201ENST00000458676 1807 ntBASIC3.28□□□□□ -1.88
LIMA1Q9UHB6 RNU6-282P-201ENST00000365357 103 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 SNORA54-201ENST00000384281 123 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC005326.1-201ENST00000429197 123 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 RPS24P13-201ENST00000442520 397 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 CECR9-201ENST00000453421 199 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 FABP5P15-201ENST00000453566 214 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 C1DP4-201ENST00000455429 424 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 RPL12P25-201ENST00000455592 494 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AP002812.1-201ENST00000495378 474 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC138853.1-201ENST00000503549 823 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC117522.1-201ENST00000509821 380 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 OR5B19P-201ENST00000531766 928 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AGGF1P4-201ENST00000568249 801 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC068135.2-201ENST00000569293 1028 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC098848.2-201ENST00000588023 330 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AL121992.2-201ENST00000606262 256 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 FTX_3.1-201ENST00000610451 147 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 HULC.1-201ENST00000612720 240 ntBASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.27□□□□□ -1.89
LIMA1Q9UHB6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 MIR22-201ENST00000362190 85 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 RNU6-198P-201ENST00000384258 104 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 Y_RNA.582-201ENST00000391023 95 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 AL354719.1-201ENST00000406535 843 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 RNU2-16P-201ENST00000410712 136 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 RPS12P24-201ENST00000412619 387 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 AL451062.2-201ENST00000427515 271 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 USP9YP14-201ENST00000430663 563 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 GPM6BP2-201ENST00000432046 144 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 RPL23AP30-201ENST00000432419 501 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 AL591212.2-201ENST00000433923 257 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 SNRPEP9-201ENST00000436794 238 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 GPM6BP1-201ENST00000446387 144 ntBASIC3.26□□□□□ -1.89
LIMA1Q9UHB6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms