Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RPL39P6-201ENST00000448289 150 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC88CQ9P219 AC140059.1-201ENST00000489238 361 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 EIF4EP3-201ENST00000498782 656 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 AC104685.1-201ENST00000502445 371 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.5□□□□□ -2.17
CCDC88CQ9P219 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.5□□□□□ -2.17
CCDC88CQ9P219 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC88CQ9P219 SETP7-201ENST00000552169 453 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC88CQ9P219 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 MIR3912-201ENST00000577566 105 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 AP005229.2-201ENST00000609980 697 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 AL162373.1-201ENST00000620433 407 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 AC004009.2-201ENST00000623016 728 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 AC093875.1-201ENST00000623688 504 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
CCDC88CQ9P219 AC009812.4-201ENST00000569134 1805 ntBASIC1.5□□□□□ -2.17
CCDC88CQ9P219 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 DDX10P1-201ENST00000448545 1933 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 Y_RNA.4-201ENST00000362333 112 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 RNU6-216P-201ENST00000363282 104 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 RNU6-549P-201ENST00000384433 107 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC092634.6-201ENST00000418558 192 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 RPS26P30-201ENST00000443431 335 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 MTCYBP11-201ENST00000447254 1109 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AL353718.1-201ENST00000451028 517 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 OFD1P3Y-201ENST00000453312 783 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 USP9YP10-201ENST00000454868 628 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 RNU7-23P-201ENST00000459465 62 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC026410.2-201ENST00000460281 156 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC097493.1-201ENST00000463958 372 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 RN7SL274P-201ENST00000492268 272 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 MTCYBP16-201ENST00000509187 1129 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC007375.1-201ENST00000554513 578 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 RPS3AP4-201ENST00000555161 764 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC015720.1-201ENST00000565251 277 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC007151.1-201ENST00000572774 483 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 HMGN2P15-201ENST00000585707 270 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 BBIP1P1-201ENST00000602999 279 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AP005137.2-201ENST00000609238 400 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC011477.1-204ENST00000623416 1325 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 RNA5SP247-201ENST00000411181 105 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC074117.2-201ENST00000417130 397 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 ZNF90P2-204ENST00000419323 1075 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 MOB1AP2-201ENST00000446060 614 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC079776.3-201ENST00000450665 370 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC069528.1-202ENST00000482888 637 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 RPL30P5-201ENST00000494923 336 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 COL6A4P2-205ENST00000509855 506 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC109464.2-201ENST00000510242 943 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 SNORD19.2-201ENST00000516978 73 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AL391261.3-201ENST00000557194 520 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC098483.2-201ENST00000603158 454 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AL161729.4-201ENST00000604650 476 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC107214.2-201ENST00000608204 634 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 FTX_3.1-201ENST00000610451 147 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 AC098657.3-201ENST00000620434 263 ntBASIC1.49□□□□□ -2.17
CCDC88CQ9P219 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC88CQ9P219 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 Z82195.2-201ENST00000612348 18351 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 RNU6-657P-201ENST00000383904 107 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC88CQ9P219 RNU6-920P-201ENST00000410926 92 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AL030996.1-201ENST00000411430 235 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 Z85995.1-201ENST00000415547 335 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AC027644.1-201ENST00000419595 298 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 UBE2D3P3-201ENST00000426992 425 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 TRGVB-201ENST00000453257 471 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AC244505.3-201ENST00000454598 187 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC88CQ9P219 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC88CQ9P219 OR10AB1P-201ENST00000609613 938 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AC073592.7-201ENST00000623659 507 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AP003485.1-201ENST00000625093 753 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 MIR7157-201ENST00000635801 60 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 AP003399.1-201ENST00000637534 361 ntBASIC1.48□□□□□ -2.17
CCDC88CQ9P219 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC88CQ9P219 RNU6-353P-201ENST00000364266 108 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms