Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 MIR422A-201ENST00000362286 90 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 RNU6-288P-201ENST00000363690 104 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 RPS3AP36-201ENST00000398190 775 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AL353729.1-201ENST00000425044 720 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 MED13P1-201ENST00000428342 171 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AL591704.1-201ENST00000432574 275 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 Z96811.1-201ENST00000445880 108 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 RPS29P20-201ENST00000489592 171 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AC105252.1-201ENST00000503089 286 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 RNA5SP341-201ENST00000516261 117 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 HMGB1P41-201ENST00000520234 440 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AC005771.1-201ENST00000585581 349 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 Z99497.2-201ENST00000603634 310 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AC019159.1-201ENST00000605094 187 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AC091304.9-201ENST00000612091 226 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 PISRT1-201ENST00000626175 531 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 AL021368.2-201ENST00000606125 5352 ntBASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
BLOC1S4Q9NUP1 FARSBP1-201ENST00000435808 1778 ntBASIC3.28□□□□□ -1.89
BLOC1S4Q9NUP1 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 RNA5SP387-201ENST00000364226 106 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 RNU6-750P-201ENST00000390946 107 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 SNORA40.3-201ENST00000390964 122 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AL513477.1-202ENST00000417061 214 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 SKA2P1-201ENST00000425592 390 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AL592045.1-201ENST00000429867 352 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 RPS29P6-201ENST00000438196 145 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 SNORD42A-201ENST00000459584 64 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 RPS29P26-201ENST00000477483 171 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 RPS29P2-201ENST00000479278 136 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AP004217.1-201ENST00000480579 346 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 Vault.3-201ENST00000516676 95 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 RNU6-703P-201ENST00000516946 107 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 H3F3AP1-201ENST00000559984 334 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AC025811.1-201ENST00000604312 472 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AC022893.3-201ENST00000607665 437 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AC131902.3-201ENST00000611767 581 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AL512643.1-201ENST00000635735 524 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 MTND5P19-201ENST00000424872 1794 ntBASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BLOC1S4Q9NUP1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 MTND4P35-201ENST00000604257 1375 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 NACAP2-201ENST00000318548 624 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 SNORA20.2-201ENST00000383922 131 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AC127391.1-201ENST00000411737 98 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AC006946.1-201ENST00000429106 328 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 BRK1P2-201ENST00000442875 223 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 SNORD19.2-201ENST00000516978 73 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 RN7SKP272-201ENST00000516988 232 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AP002453.2-201ENST00000533503 320 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AC010546.1-201ENST00000569391 485 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 MIR4325-201ENST00000583049 90 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AL133173.2-201ENST00000614270 90 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AL359547.2-201ENST00000615810 418 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 MIR3974-201ENST00000637126 96 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms