Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.45□□□□□ -1.86
DDX4Q9NQI0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 DEFB108F-201ENST00000344638 222 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 SNORA23-201ENST00000365128 182 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 RNU6-1103P-201ENST00000384150 107 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 RNU6-851P-201ENST00000384565 107 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 U3.42-201ENST00000408746 214 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 RN7SKP285-201ENST00000410137 318 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 NUP35P1-201ENST00000422734 947 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC079780.1-201ENST00000428259 207 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC073464.1-201ENST00000429823 534 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AL358934.1-201ENST00000432346 324 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 SNORD97-201ENST00000459187 142 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 RPL9P6-201ENST00000492764 598 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC105914.1-201ENST00000511798 226 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 RNU6-506P-201ENST00000516553 94 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 SNORD59.2-201ENST00000516873 68 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 RNU6-840P-201ENST00000517275 65 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC022616.3-201ENST00000523940 148 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC016957.1-201ENST00000534895 309 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC128657.1-201ENST00000549459 145 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 MIR3167-201ENST00000579623 85 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC138761.3-201ENST00000579993 334 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC105224.1-201ENST00000587055 421 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AP001330.4-201ENST00000604350 154 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AL355810.1-201ENST00000614629 552 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 U4.5-201ENST00000617137 123 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 AC027514.1-201ENST00000588561 1603 ntBASIC3.44□□□□□ -1.86
DDX4Q9NQI0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.44□□□□□ -1.86
DDX4Q9NQI0 SRP72P2-201ENST00000344851 1979 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 ZNF826P-207ENST00000622273 1910 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 RNU6-511P-201ENST00000363496 107 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 RNU6-1097P-201ENST00000363586 107 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 SNORA9.2-201ENST00000365361 133 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 RNU6-108P-201ENST00000365558 107 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 Y_RNA.516-201ENST00000384541 124 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 TXNP7-201ENST00000406296 293 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 RPL32P35-201ENST00000415214 394 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AL139281.1-201ENST00000422120 335 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 MTCO3P30-201ENST00000426425 670 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 TIMM9P3-201ENST00000428659 274 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 USP12PX-201ENST00000432383 1057 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC093392.2-201ENST00000450682 337 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AL109933.2-201ENST00000452651 260 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 RN7SL442P-201ENST00000473804 320 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC108860.1-201ENST00000484521 383 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC023194.1-201ENST00000493084 308 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC123904.3-201ENST00000547218 814 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 MIR4293-201ENST00000584305 78 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AF038458.1-201ENST00000588406 262 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AP000860.1-201ENST00000605250 559 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AC103710.2-201ENST00000609912 942 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 AL110115.1-201ENST00000614396 364 ntBASIC3.43□□□□□ -1.86
DDX4Q9NQI0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
DDX4Q9NQI0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
DDX4Q9NQI0 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.42□□□□□ -1.86
DDX4Q9NQI0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms