Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 AL049838.1-201ENST00000563647 981 ntBASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 AC106782.4-201ENST00000568264 210 ntBASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 SNORD14A-201ENST00000606526 91 ntBASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 AC084757.4-201ENST00000616350 526 ntBASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 U4atac.1-201ENST00000618345 95 ntBASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 AC244517.12-201ENST00000623581 663 ntBASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 TEX21P-201ENST00000447107 1476 ntBASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 HSPA8P4-201ENST00000511877 1920 ntBASIC1.68□□□□□ -2.14
SND1-IT1Q9HBX3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-188P-201ENST00000364207 107 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RNU1-112P-201ENST00000364401 164 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 MIR218-1-201ENST00000384999 110 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RNU4-72P-201ENST00000410754 173 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AL592148.1-201ENST00000413568 445 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 HMGB1P11-201ENST00000413899 637 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 MTCO2P21-201ENST00000419780 677 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AL109913.1-201ENST00000421173 514 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AL139132.1-201ENST00000431587 344 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC098826.1-201ENST00000433943 471 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 TIMM9P1-201ENST00000436122 256 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC016691.1-201ENST00000441321 413 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 IFNA11P-201ENST00000446352 526 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 OR6C5P-201ENST00000452388 923 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-953P-201ENST00000459154 107 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 SNORD97-201ENST00000459187 142 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC073901.1-201ENST00000462471 408 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RN7SL432P-201ENST00000484057 298 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RPL39P36-201ENST00000490784 156 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC018437.1-201ENST00000492214 406 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RPL22P13-201ENST00000493291 347 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RNA5SP82-201ENST00000516707 92 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-1183P-201ENST00000517054 60 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AP003122.3-201ENST00000526316 255 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC084851.1-201ENST00000529105 249 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AL356432.3-201ENST00000568952 465 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 MTCYBP22-201ENST00000603788 447 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AL645944.1-201ENST00000603857 493 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AL358072.1-201ENST00000604156 575 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AL109618.2-201ENST00000605527 211 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 MIR6134-201ENST00000617606 109 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AL731566.2-201ENST00000618971 317 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC007490.1-201ENST00000624321 703 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC010608.3-201ENST00000625048 527 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 PISRT1-201ENST00000626175 531 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 AC103706.2-201ENST00000638080 240 ntBASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.67□□□□□ -2.14
SND1-IT1Q9HBX3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 ZNF29P-201ENST00000225587 168 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 RNA5SP125-201ENST00000364843 120 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 RNU1-140P-201ENST00000365040 165 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-83P-201ENST00000384568 112 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-925P-201ENST00000384629 104 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 SNORA80E-201ENST00000384744 137 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 MIR144-201ENST00000384886 86 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC119751.3-201ENST00000399720 670 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 MTCO2P8-201ENST00000412213 658 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 ELOCP17-201ENST00000414751 326 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 RAC1P6-201ENST00000423911 575 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 YME1L1P1-201ENST00000429435 297 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 MTND1P32-201ENST00000433043 938 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC004854.1-201ENST00000440356 349 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 NEFMP1-201ENST00000443423 1006 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 BX510359.1-201ENST00000456973 237 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 SNORA84-201ENST00000459229 133 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms