Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 HLF-210ENST00000575345 3589 ntTSL 2 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 SNORA16B-201ENST00000364674 135 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 RNA5SP23-201ENST00000391006 105 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 RNA5SP265-201ENST00000411023 111 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 AL359711.1-201ENST00000441999 123 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 RNU7-23P-201ENST00000459465 62 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 AC098818.1-201ENST00000478593 252 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 SNORA74.3-201ENST00000517108 154 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 RNU6-1116P-201ENST00000517269 99 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 COX4I1P1-201ENST00000554239 509 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 BCAP31P2-201ENST00000563143 399 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 BCAP31P1-201ENST00000565437 385 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 RN7SL473P-201ENST00000580341 299 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 AC016629.2-201ENST00000597341 199 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 RN7SL820P-201ENST00000616437 299 ntBASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ACACB-203ENST00000377854 6588 ntTSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
KRTAP3-3Q9BYR6 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 MITF-203ENST00000328528 4680 ntTSL 5 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 AP000542.2-201ENST00000623199 6179 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 NOS1-202ENST00000338101 4462 ntTSL 5 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 RNA5SP72-201ENST00000364442 117 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 RNU6-243P-201ENST00000391140 107 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 RNU6-1254P-201ENST00000391266 104 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 SNORD3J-201ENST00000408473 190 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 TMSB10P1-201ENST00000415070 132 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 PPIL1P1-201ENST00000423936 499 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 RN7SL77P-201ENST00000473332 294 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 RN7SL297P-201ENST00000483161 293 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 AC018695.1-201ENST00000484096 664 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 MYADML-203ENST00000491596 951 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 AL163195.1-201ENST00000496941 348 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 SNRPCP8-201ENST00000514820 211 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 AP005597.3-201ENST00000532369 799 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 KDM1B-203ENST00000546309 496 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 RN7SL113P-201ENST00000619959 299 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR8089-201ENST00000620165 82 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 MIR6715B-201ENST00000637172 77 ntBASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC3.8□□□□□ -1.8
KRTAP3-3Q9BYR6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms