Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RNU6-402P-201ENST00000410678 103 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC021876.1-201ENST00000425959 359 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 HMGB3P12-201ENST00000438745 556 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RPL7P43-201ENST00000478876 753 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RN7SL504P-201ENST00000494496 287 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 SUMO2P5-201ENST00000506790 245 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU1-41P-201ENST00000516161 162 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU1-48P-201ENST00000516400 162 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC087441.2-201ENST00000529141 262 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 APOOP3-201ENST00000536787 586 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AL049861.1-201ENST00000603130 150 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC025588.2-201ENST00000604851 466 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC135178.6-201ENST00000605314 398 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AP004247.3-201ENST00000608682 624 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RMST_3.1-201ENST00000611651 109 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.29-201ENST00000362570 113 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU1-14P-201ENST00000362759 152 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU6-627P-201ENST00000364032 102 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU6-1164P-201ENST00000364428 107 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.318-201ENST00000365131 97 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.512-201ENST00000384518 102 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MIR513A2-201ENST00000385249 127 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MRPL42P2-201ENST00000403169 426 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 COTL1P1-201ENST00000422309 375 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC096632.1-201ENST00000427395 310 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC234064.1-201ENST00000436312 247 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC114495.1-201ENST00000441274 436 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MTCO3P2-201ENST00000457365 171 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC022137.1-201ENST00000483735 151 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 HIGD1AP3-201ENST00000515857 278 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.670-201ENST00000516255 105 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU6-678P-201ENST00000516832 109 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU6-64P-201ENST00000517119 105 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 KCTD9P4-201ENST00000526766 1166 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC005261.5-201ENST00000596280 355 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC004792.1-201ENST00000614523 137 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.73-201ENST00000362910 113 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 SNORD1A-201ENST00000364968 72 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.478-201ENST00000384358 107 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 SNORD14D-201ENST00000384390 87 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Y_RNA.579-201ENST00000390939 94 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC068050.1-201ENST00000394891 380 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MRPL35P1-201ENST00000404272 572 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RNU6-1064P-201ENST00000410626 104 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 E2F6P2-201ENST00000420708 748 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MTND4LP9-201ENST00000427694 174 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AC005326.1-201ENST00000429197 123 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 Z98742.2-201ENST00000431564 187 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 AL138799.3-201ENST00000438968 350 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RPS26P45-201ENST00000471748 340 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RPL35P6-201ENST00000490024 372 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 RN7SL812P-201ENST00000493791 279 ntBASIC1.32□□□□□ -2.2
HMCN1Q96RW7 MTHFD2P4-201ENST00000515074 1025 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms