Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 SNURFL-201ENST00000309296 343 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 RNA5SP515-201ENST00000364570 118 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 RNU1-73P-201ENST00000383971 164 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 SNORA1-201ENST00000384107 130 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 MT-TI-201ENST00000387365 69 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 RNU6-938P-201ENST00000411285 103 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 CYCSP48-201ENST00000417124 323 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 AC004941.2-201ENST00000427009 228 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 AC018634.1-201ENST00000437554 401 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 SNORD11-201ENST00000459124 84 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 RN7SL165P-201ENST00000477476 291 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 RN7SKP57-201ENST00000517248 293 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 EIF4A1P12-201ENST00000551910 141 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 AC138207.8-204ENST00000579588 527 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 MIR212-201ENST00000586026 110 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 AL034555.1-201ENST00000604816 211 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 AC004241.2-201ENST00000614562 444 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 TCL6_3.1-201ENST00000619064 137 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 AC068213.1-201ENST00000625124 226 ntBASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MS4A3Q96HJ5 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 AC010329.1-201ENST00000593903 8328 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 RNU6-219P-201ENST00000364728 107 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 RNU6-1280P-201ENST00000365211 107 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 RNA5SP85-201ENST00000365378 119 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 Y_RNA.486-201ENST00000384398 107 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 HMGN2P30-201ENST00000423237 256 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 RPL12P49-201ENST00000441100 121 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 OR9P1P-201ENST00000496431 281 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 AC114324.2-202ENST00000503812 134 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 DOCK11P1-201ENST00000553480 5932 ntBASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
MS4A3Q96HJ5 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MS4A3Q96HJ5 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MS4A3Q96HJ5 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
MS4A3Q96HJ5 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
MS4A3Q96HJ5 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 RNU6-1099P-201ENST00000363533 107 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 SNORA18.2-201ENST00000383865 132 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 MIR551B-201ENST00000384984 96 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 AL355796.1-201ENST00000406706 323 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 AC092047.1-201ENST00000424997 240 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 RPS26P47-201ENST00000427219 348 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 AC064862.5-201ENST00000440618 334 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 COL11A2P1-205ENST00000441798 676 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 AL356121.1-201ENST00000442911 156 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 REG1CP-206ENST00000447469 496 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 RPL23AP56-201ENST00000460778 453 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 SNRPCP11-201ENST00000492453 205 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 RNA5SP206-201ENST00000516703 121 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms