Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MTND1P3-201ENST00000484956 952 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AC109486.1-201ENST00000486833 374 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 RNA5SP337-201ENST00000517007 109 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 OSBPL9P5-201ENST00000542581 171 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AL359212.1-201ENST00000556608 614 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 MIR3945-201ENST00000581853 98 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AC008507.1-201ENST00000587506 734 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 BNIP3P8-201ENST00000597863 560 ntBASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SNRNP40Q96DI7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 RNU5E-6P-201ENST00000365574 115 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 RNU6-658P-201ENST00000384606 106 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 RPS7P13-201ENST00000413955 498 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC245291.1-201ENST00000419501 328 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC093106.2-201ENST00000428212 385 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 Z99127.3-201ENST00000448158 395 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 FABP5P15-201ENST00000453566 214 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 RN7SL442P-201ENST00000473804 320 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 RPS15AP34-201ENST00000487776 387 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 RPL39P36-201ENST00000490784 156 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 NDUFB4P2-201ENST00000509515 391 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 RN7SKP132-201ENST00000516001 208 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AP003467.2-201ENST00000520175 319 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 RPL21P5-201ENST00000554662 472 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC010546.1-201ENST00000569391 485 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 MIR4319-201ENST00000577285 85 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 MIR548AB-201ENST00000584917 84 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC012065.4-201ENST00000602445 679 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC103710.2-201ENST00000609912 942 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC025594.3-201ENST00000613068 790 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC108479.2-201ENST00000617314 601 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC092140.2-201ENST00000618027 521 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AC022079.1-201ENST00000621546 602 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AL512643.1-201ENST00000635735 524 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 AL137003.2-201ENST00000606924 2538 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 CR848007.1-201ENST00000442354 1699 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 ADAM3A-203ENST00000461344 2157 ntBASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
SNRNP40Q96DI7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AC026241.1-201ENST00000517873 2142 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AC110491.1-201ENST00000562191 2010 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 ELF2P3-201ENST00000445099 1506 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 SNORD56.2-201ENST00000363242 71 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 MT-TH-201ENST00000387441 69 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AL445529.1-201ENST00000398713 389 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AL139397.2-201ENST00000404529 772 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 RNA5SP184-201ENST00000411071 108 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 RPS12P24-201ENST00000412619 387 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AL353729.1-201ENST00000425044 720 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AL589872.1-201ENST00000426602 288 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 ISCA1P1-201ENST00000426679 387 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AL592045.1-201ENST00000429867 352 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AL591212.2-201ENST00000433923 257 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AC105272.1-201ENST00000438604 198 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 RPS24P13-201ENST00000442520 397 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 UBBP3-201ENST00000445497 241 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 FABP5P13-201ENST00000452144 328 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 MTCO2P29-201ENST00000465212 189 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 RPS27AP10-201ENST00000496103 208 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AC083906.5-201ENST00000503722 328 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AC113155.1-201ENST00000511141 769 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 FABP5P5-201ENST00000515537 406 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 Y_RNA.672-201ENST00000516289 104 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.75□□□□□ -1.97
SNRNP40Q96DI7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms