Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 MIR3939-201ENST00000582614 106 ntBASIC5.22□□□□□ -1.57
RETREG2Q8NC44 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.22□□□□□ -1.57
RETREG2Q8NC44 RNU6-6P-201ENST00000606623 107 ntBASIC5.22□□□□□ -1.57
RETREG2Q8NC44 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC5.22□□□□□ -1.57
RETREG2Q8NC44 PLCE1P1-201ENST00000622094 305 ntBASIC5.22□□□□□ -1.57
RETREG2Q8NC44 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETREG2Q8NC44 ZNF137P-201ENST00000456718 1920 ntBASIC5.22□□□□□ -1.57
RETREG2Q8NC44 ZNF807-201ENST00000328088 1707 ntBASIC5.22□□□□□ -1.57
RETREG2Q8NC44 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETREG2Q8NC44 SCN1A-220ENST00000641603 12506 ntBASIC5.22□□□□□ -1.57
RETREG2Q8NC44 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RETREG2Q8NC44 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.22□□□□□ -1.57
RETREG2Q8NC44 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.22□□□□□ -1.57
RETREG2Q8NC44 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
RETREG2Q8NC44 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RETREG2Q8NC44 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 Y_RNA.112-201ENST00000363250 102 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 RNU6-790P-201ENST00000384479 105 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 MIR606-201ENST00000384851 96 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AL590762.2-201ENST00000395798 571 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 SNORD56-201ENST00000413522 71 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 HMGB3P8-201ENST00000449709 577 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AL031274.1-201ENST00000450334 232 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AC128713.1-201ENST00000471495 306 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AL132838.2-201ENST00000492041 314 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 SMURF2P1-201ENST00000514992 481 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 RNU6-703P-201ENST00000516946 107 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 ELOCP31-201ENST00000540463 467 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AC091516.1-201ENST00000549191 703 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AC011494.1-201ENST00000596454 237 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AL355802.3-201ENST00000607571 545 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AC011890.2-201ENST00000613393 294 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AC011944.2-201ENST00000624440 683 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 AC007656.2-201ENST00000624902 4547 ntBASIC5.21□□□□□ -1.58
RETREG2Q8NC44 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RETREG2Q8NC44 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 SRP72P2-201ENST00000344851 1979 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 NEAT1-202ENST00000501122 22743 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AC117470.1-201ENST00000381974 330 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 RNU6-1035P-201ENST00000384477 107 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AL591034.1-201ENST00000407447 340 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AC022795.1-201ENST00000473808 480 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 RPL23AP65-201ENST00000475608 468 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 DEFB109F-201ENST00000491870 277 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 ACA59.1-201ENST00000515966 143 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 RNU6-1213P-201ENST00000517075 94 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AC018889.1-201ENST00000605372 397 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AC023043.4-201ENST00000612081 449 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AC004852.3-201ENST00000614131 326 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AL161629.2-201ENST00000615347 275 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AF117829.1-206ENST00000621883 3802 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RETREG2Q8NC44 MAPK10-303ENST00000641324 3959 ntBASIC5.2□□□□□ -1.58
RETREG2Q8NC44 RAD17P1-201ENST00000418130 2042 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RETREG2Q8NC44 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RETREG2Q8NC44 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RETREG2Q8NC44 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RETREG2Q8NC44 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RETREG2Q8NC44 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.19□□□□□ -1.58
RETREG2Q8NC44 Y_RNA.151-201ENST00000363566 112 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 RNU6-596P-201ENST00000365395 98 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 RNU6-890P-201ENST00000384121 107 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 SNORD96B-201ENST00000386148 79 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 RPS4XP3-201ENST00000398541 413 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 AC093151.1-201ENST00000427711 313 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
RETREG2Q8NC44 USP9YP30-201ENST00000430729 455 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 AL133396.1-201ENST00000432048 687 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 RPL12P25-201ENST00000455592 494 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.19□□□□□ -1.58
RETREG2Q8NC44 AL163540.1-201ENST00000485382 386 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 AC114801.2-201ENST00000503825 781 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 AC113155.1-201ENST00000511141 769 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 RNU6-988P-201ENST00000519081 107 ntBASIC5.19□□□□□ -1.58
RETREG2Q8NC44 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms