Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 SCARNA17.1-201ENST00000516211 143 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 RNU6-311P-201ENST00000516224 102 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 SCARNA17.2-201ENST00000516334 143 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 RNU6-64P-201ENST00000517119 105 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AP000907.2-201ENST00000530827 353 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AC068587.4-201ENST00000533893 186 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 GTF3AP2-201ENST00000557014 266 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AC023824.2-201ENST00000566185 400 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 ISCA1P3-201ENST00000577104 373 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AC068790.3-201ENST00000602988 553 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AL160281.1-201ENST00000605307 311 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AC092953.2-201ENST00000608000 699 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 SCARNA17.4-201ENST00000614296 143 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 AL607023.1-201ENST00000620045 248 ntBASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NUDCD3Q8IVD9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 OR5J1P-201ENST00000313544 939 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 RNU6-1167P-201ENST00000363227 94 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 RN7SKP226-201ENST00000364912 300 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AL008987.1-201ENST00000415528 237 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 USP9YP27-201ENST00000418455 438 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 RPL7P36-201ENST00000444633 681 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 RPS27AP10-201ENST00000496103 208 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 RNU5A-4P-201ENST00000516588 111 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 SNORA31.18-201ENST00000517043 134 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 RN7SKP258-201ENST00000517151 304 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC087276.1-201ENST00000529659 480 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 MIR4293-201ENST00000584305 78 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC011458.1-201ENST00000604034 617 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC091965.4-201ENST00000607691 587 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 OR10AB1P-201ENST00000609613 938 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AL355472.4-201ENST00000610233 626 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC013562.2-201ENST00000611632 603 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC245884.12-201ENST00000615364 59 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AL160394.1-201ENST00000624765 724 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 MTND4P16-201ENST00000466108 1367 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
NUDCD3Q8IVD9 MIR518C-201ENST00000384822 101 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 MIR34A-201ENST00000385130 110 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 HMGB1P11-201ENST00000413899 637 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 BPY2DP-201ENST00000422208 265 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 SKA2P1-201ENST00000425592 390 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 RPS15AP28-201ENST00000435088 386 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 EIF4BP1-201ENST00000554881 351 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AC098826.3-201ENST00000603823 466 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AL031281.1-201ENST00000604049 488 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AL161798.1-201ENST00000604630 131 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AC022960.3-201ENST00000619794 441 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 AC091965.5-201ENST00000624785 342 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
NUDCD3Q8IVD9 MTND5P29-201ENST00000458676 1807 ntBASIC2.28□□□□□ -2.04
NUDCD3Q8IVD9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
NUDCD3Q8IVD9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NUDCD3Q8IVD9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NUDCD3Q8IVD9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.28□□□□□ -2.04
NUDCD3Q8IVD9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NUDCD3Q8IVD9 RNU6-778P-201ENST00000363269 103 ntBASIC2.28□□□□□ -2.04
NUDCD3Q8IVD9 RNU5A-8P-201ENST00000364102 114 ntBASIC2.28□□□□□ -2.04
NUDCD3Q8IVD9 MIR524-201ENST00000385242 87 ntBASIC2.28□□□□□ -2.04
NUDCD3Q8IVD9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms