Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 AC106900.2-201ENST00000604994 317 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AL109618.2-201ENST00000605527 211 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC007619.2-201ENST00000605743 379 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AC008536.2-201ENST00000607284 349 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 AL110115.1-201ENST00000614396 364 ntBASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.75□□□□□ -1.97
LRRTM1Q86UE6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 ZNF285B-201ENST00000561698 1767 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RNU6-223P-201ENST00000362830 107 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RNU6-1284P-201ENST00000363701 100 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 SNORA51.4-201ENST00000364993 124 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AL359837.1-201ENST00000381357 287 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RNU6-641P-201ENST00000384006 107 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RNU6-14P-201ENST00000384630 106 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RNU6-606P-201ENST00000384721 111 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AL139397.2-201ENST00000404529 772 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RN7SKP58-201ENST00000411010 305 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 USP9YP27-201ENST00000418455 438 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 HMGB1P31-201ENST00000437242 427 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 HMGB3P12-201ENST00000438745 556 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC016691.1-201ENST00000441321 413 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AL121871.1-201ENST00000443413 436 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC079781.2-201ENST00000446424 169 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RPL21P23-201ENST00000446654 460 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 MRPS17P3-201ENST00000465453 385 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC006512.1-201ENST00000468816 291 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RPS29P25-201ENST00000481709 171 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RNU1-61P-201ENST00000516107 151 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RNU6-1281P-201ENST00000516223 105 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 SNORA40.12-201ENST00000516329 111 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RNU6-1092P-201ENST00000516955 87 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 HMGN1P28-201ENST00000521340 364 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 ERHP1-201ENST00000523006 310 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AP006587.4-201ENST00000526053 529 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC109635.3-201ENST00000529536 185 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AL157687.1-201ENST00000554853 619 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC106785.1-201ENST00000565935 262 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC055876.1-202ENST00000567053 138 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC068135.2-201ENST00000569293 1028 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 MIR4276-201ENST00000584832 70 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC104458.1-201ENST00000608243 463 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 uc_338.25-201ENST00000613756 156 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AL589994.2-201ENST00000621124 579 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 AC244100.1-202ENST00000621554 382 ntBASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRTM1Q86UE6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 AL353743.1-202ENST00000431724 1695 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 Y_RNA.126-201ENST00000363382 111 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 SNORA62.1-201ENST00000364287 154 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 Y_RNA.295-201ENST00000364918 102 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 SNORA5A-201ENST00000384111 134 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 SNORA24.1-201ENST00000384401 135 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 NDUFS5P1-201ENST00000405668 289 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 TXNP7-201ENST00000406296 293 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 U3.42-201ENST00000408746 214 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 RNU2-39P-201ENST00000410604 198 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 RNA5SP344-201ENST00000411081 104 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 MRPL50P2-201ENST00000416821 482 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 MTCYBP8-201ENST00000422855 651 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 AL445584.1-201ENST00000431451 330 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 WASF1P1-201ENST00000447560 1131 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 DPPA3P1-201ENST00000448050 469 ntBASIC2.73□□□□□ -1.97
LRRTM1Q86UE6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms