Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC100810.6-201ENST00000638068 285 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 AC099654.10-201ENST00000640395 161 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 ASNSP3-201ENST00000451989 1306 ntBASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.14□□□□□ -1.75
UBE3BQ7Z3V4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-552P-201ENST00000362869 119 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RNU4-73P-201ENST00000363164 141 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-525P-201ENST00000363685 104 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 SNORA62.1-201ENST00000364287 154 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 Y_RNA.231-201ENST00000364358 102 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-837P-201ENST00000391056 108 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RN7SKP32-201ENST00000410167 303 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RNU2-29P-201ENST00000410423 189 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AL158071.1-201ENST00000430315 461 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 TAAR7P-201ENST00000436141 242 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AL162389.1-201ENST00000449233 177 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 MTND3P16-201ENST00000452205 344 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC234775.1-201ENST00000454247 670 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RPS29P15-201ENST00000458329 171 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RPL23AP67-201ENST00000465341 474 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC078817.1-201ENST00000492623 435 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC110794.1-201ENST00000505816 425 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC092436.1-201ENST00000506450 503 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RNU4-29P-201ENST00000515943 174 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-1092P-201ENST00000516955 87 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC107934.2-201ENST00000518653 310 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 HIGD1AP1-201ENST00000550979 275 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 MIR4424-201ENST00000585257 86 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC073657.2-201ENST00000605661 303 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 TUG1_2.1-201ENST00000614234 87 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 AC090617.10-201ENST00000624308 134 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 EXOC5P1-201ENST00000510543 1969 ntBASIC4.13□□□□□ -1.75
UBE3BQ7Z3V4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-1249P-201ENST00000363237 111 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 RNA5SP167-201ENST00000365461 116 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 Y_RNA.356-201ENST00000365475 113 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 RNU4-20P-201ENST00000365601 151 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 SNORA48.2-201ENST00000390926 124 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AL356432.1-201ENST00000405809 419 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-712P-201ENST00000410558 100 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-1148P-201ENST00000410992 104 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AC008850.1-201ENST00000427546 362 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 RPL23AP11-201ENST00000475260 469 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AC091885.1-201ENST00000506658 268 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AC004062.1-201ENST00000509926 645 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AC243972.3-201ENST00000539655 198 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 MIR4703-201ENST00000577728 79 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 MIR5004-201ENST00000579078 107 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 IGHV3-29-201ENST00000604817 344 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AC005000.2-201ENST00000605468 310 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AC021646.1-201ENST00000605469 484 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-89P-201ENST00000606519 100 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 SNHG22-203ENST00000617833 660 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 DDX10P1-201ENST00000448545 1933 ntBASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UBE3BQ7Z3V4 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 TAB3P1-202ENST00000452645 1634 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 AL137003.2-201ENST00000606924 2538 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-1029P-201ENST00000384109 107 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 MIR128-1-201ENST00000384921 82 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 RNU6-510P-201ENST00000391239 108 ntBASIC4.11□□□□□ -1.75
UBE3BQ7Z3V4 RPL21P24-201ENST00000413752 448 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms