Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC084198.1-201ENST00000477747 402 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.721-201ENST00000517207 102 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 ERHP1-201ENST00000523006 310 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AC233702.9-201ENST00000581528 203 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 AC012119.1-201ENST00000603184 222 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 PRO1804-201ENST00000623780 2050 ntBASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USPL1Q5W0Q7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 ZNF285B-201ENST00000561698 1767 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.47-201ENST00000362697 108 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.455-201ENST00000384230 98 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 SNORD3H-201ENST00000384486 214 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 SNORA41-201ENST00000384675 132 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 MIR1179-201ENST00000408703 91 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 RN7SKP156-201ENST00000410308 342 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 HMGB3P2-201ENST00000411913 584 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 SSXP9-201ENST00000417503 292 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 RPS11P1-201ENST00000451072 473 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 RPL21P41-201ENST00000459863 264 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 AP000926.1-201ENST00000479573 241 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 RNU6-475P-201ENST00000516073 104 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 AC126177.3-201ENST00000551839 688 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 MIR5684-201ENST00000585074 65 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 AC011494.1-201ENST00000596454 237 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 AC009093.8-201ENST00000641769 292 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 MAPK10-320ENST00000641462 6696 ntBASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USPL1Q5W0Q7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 DDX18P3-201ENST00000404856 2007 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 RNU1-15P-201ENST00000353977 144 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 RNU6-266P-201ENST00000364225 107 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 Y_RNA.527-201ENST00000384573 102 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 U8.11-201ENST00000384699 133 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 U8.12-201ENST00000384701 133 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 PRDX3P3-201ENST00000447765 522 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 U8.18-201ENST00000459285 133 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 RNU6-699P-201ENST00000517081 110 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 RNU6-264P-201ENST00000517134 104 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 IGKV2-23-201ENST00000518729 323 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AC091516.1-201ENST00000549191 703 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AC025423.5-201ENST00000550230 219 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 SNORD84-203ENST00000584275 78 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AC012314.7-201ENST00000619693 93 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AC091953.5-201ENST00000622919 233 ntBASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
USPL1Q5W0Q7 AC005592.1-201ENST00000566527 1640 ntBASIC5.15□□□□□ -1.58
USPL1Q5W0Q7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.15□□□□□ -1.58
USPL1Q5W0Q7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
USPL1Q5W0Q7 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
USPL1Q5W0Q7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
USPL1Q5W0Q7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms