Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RNU6-2-201ENST00000384627 107 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 RNU6-29P-201ENST00000384637 107 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 RNU6-9-201ENST00000384776 107 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 RNU6-882P-201ENST00000391025 103 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF20Q5VTR2 USP9YP7-201ENST00000436723 430 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 USP9YP32-201ENST00000452432 430 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF20Q5VTR2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF20Q5VTR2 OR51K1P-201ENST00000510214 950 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 MIR892C-201ENST00000516410 77 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 AC008694.2-201ENST00000517591 306 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF20Q5VTR2 AC091042.1-201ENST00000579213 173 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 AC209154.1-201ENST00000582156 337 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 RNU6-6P-201ENST00000606623 107 ntBASIC5.53□□□□□ -1.52
RNF20Q5VTR2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF20Q5VTR2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF20Q5VTR2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF20Q5VTR2 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF20Q5VTR2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF20Q5VTR2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 DDX18P3-201ENST00000404856 2007 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 Y_RNA.269-201ENST00000364685 89 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 SNORA71.2-201ENST00000364941 134 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 Y_RNA.352-201ENST00000365439 102 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC009237.10-201ENST00000414112 510 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 HSPD1P21-201ENST00000436541 245 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 RPL7AP28-201ENST00000464513 571 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 RPL23AP65-201ENST00000475608 468 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 NIP7P2-201ENST00000485801 544 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC026784.1-201ENST00000507986 352 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 HMGN1P11-201ENST00000508668 303 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC074250.1-201ENST00000511117 192 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 APOOP4-201ENST00000513530 597 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 Y_RNA.713-201ENST00000517013 96 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 TRAV37-201ENST00000553906 342 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC105129.1-201ENST00000560250 297 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 MIR5696-201ENST00000578474 85 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC091178.1-203ENST00000584586 279 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC009314.1-201ENST00000603871 304 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC034102.8-201ENST00000615146 484 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AC091903.1-201ENST00000624322 454 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 ZNF137P-201ENST00000456718 1920 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF20Q5VTR2 AL391684.1-202ENST00000641293 1636 ntBASIC5.52□□□□□ -1.53
RNF20Q5VTR2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 AL590399.6-201ENST00000446396 307 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 ISCUP1-201ENST00000454451 448 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 AC108022.1-201ENST00000493466 478 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 AC010469.2-201ENST00000496412 480 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 RNU4-71P-201ENST00000516258 113 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 RNU6-143P-201ENST00000516942 93 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 RNA5SP471-201ENST00000516971 106 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 IGKV1-32-201ENST00000519290 311 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 MIR3133-201ENST00000583157 78 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 AC008962.1-201ENST00000605729 304 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 AC140113.4-201ENST00000622087 222 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 U3.53-201ENST00000628922 216 ntBASIC5.51□□□□□ -1.53
RNF20Q5VTR2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF20Q5VTR2 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF20Q5VTR2 OR51H2P-202ENST00000641424 3046 ntBASIC5.5□□□□□ -1.53
RNF20Q5VTR2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF20Q5VTR2 AL672167.1-203ENST00000641299 2975 ntBASIC5.5□□□□□ -1.53
RNF20Q5VTR2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF20Q5VTR2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
RNF20Q5VTR2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RNF20Q5VTR2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF20Q5VTR2 AC007685.1-201ENST00000329806 452 ntBASIC5.5□□□□□ -1.53
RNF20Q5VTR2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms