Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 EI24P2-201ENST00000397776 1076 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 SNRPEP10-201ENST00000420249 274 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 SKA2P1-201ENST00000425592 390 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 AC122718.1-201ENST00000439448 744 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 RBMX2P4-201ENST00000441256 376 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 RANP8-201ENST00000444720 713 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 FAM133DP-201ENST00000464802 691 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 MTND4LP22-201ENST00000508209 276 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 AC112206.3-201ENST00000514578 389 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 RNU1-103P-201ENST00000516502 125 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 AC091516.1-201ENST00000549191 703 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 H3F3AP1-201ENST00000559984 334 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 RNU4-89P-201ENST00000607443 133 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 MIR6810-201ENST00000622701 70 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 AL021368.2-201ENST00000606125 5352 ntBASIC3.39□□□□□ -1.87
ATPAF1Q5TC12 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 RNU6-778P-201ENST00000363269 103 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 RNU6-1283P-201ENST00000365314 105 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 RNU6-198P-201ENST00000384258 104 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 RNU6-45P-201ENST00000384471 107 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 RNU6-393P-201ENST00000384475 107 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 RNU6-1179P-201ENST00000384667 107 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 SNORA16.2-201ENST00000390991 127 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 MIR888-201ENST00000401186 77 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 MIR1251-201ENST00000408552 70 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC104472.2-201ENST00000469035 601 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 RPL21P99-201ENST00000480369 423 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC104136.1-201ENST00000512969 394 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AL133241.1-201ENST00000556832 487 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AL391261.3-201ENST00000557194 520 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC106782.4-201ENST00000568264 210 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 MIR4801-201ENST00000582704 82 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC073539.2-201ENST00000597113 165 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC012119.1-201ENST00000603184 222 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AL591034.3-201ENST00000605511 685 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 MIR6867-201ENST00000610636 67 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AL591424.2-201ENST00000617023 128 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 MAPK10-322ENST00000641485 4530 ntBASIC3.38□□□□□ -1.87
ATPAF1Q5TC12 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 SNORD3E-201ENST00000362899 217 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 SNORD35B-201ENST00000363660 87 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 RNA5SP130-201ENST00000364431 114 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 RPS4XP7-201ENST00000406274 780 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 RNA5SP317-201ENST00000410176 116 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 RNA5SP311-201ENST00000411290 116 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 HMGN2P30-201ENST00000423237 256 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 MYL8P-204ENST00000431574 518 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 AC007389.2-201ENST00000434630 306 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 AL121601.2-201ENST00000438019 707 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 AL714022.1-201ENST00000439897 151 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 CYCSP32-201ENST00000440548 321 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 BRK1P2-201ENST00000442875 223 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 RN7SL860P-201ENST00000473738 223 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 RPL23AP11-201ENST00000475260 469 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 RPL38P4-201ENST00000502376 214 ntBASIC3.37□□□□□ -1.87
ATPAF1Q5TC12 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms