Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AP001429.1-201ENST00000602568 530 ntBASIC3.36□□□□□ -1.87
PDS5AQ29RF7 AC068944.2-201ENST00000610373 403 ntBASIC3.36□□□□□ -1.87
PDS5AQ29RF7 AC093838.1-201ENST00000613014 469 ntBASIC3.36□□□□□ -1.87
PDS5AQ29RF7 AC007998.5-201ENST00000622938 237 ntBASIC3.36□□□□□ -1.87
PDS5AQ29RF7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.36□□□□□ -1.87
PDS5AQ29RF7 MIR6863-201ENST00000636112 90 ntBASIC3.36□□□□□ -1.87
PDS5AQ29RF7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PDS5AQ29RF7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.36□□□□□ -1.87
PDS5AQ29RF7 AC092593.1-201ENST00000515413 1815 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 RNU6-859P-201ENST00000362728 107 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 RNU6-169P-201ENST00000365336 107 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 MIR135A2-201ENST00000384854 100 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 CCDC58P2-201ENST00000417131 366 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AL137014.1-201ENST00000420490 1226 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 MTCYBP5-201ENST00000423752 1135 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 USP9YP18-201ENST00000425912 695 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC137499.1-201ENST00000427602 88 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 FCF1P1-201ENST00000432690 571 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 UBE2V1P8-201ENST00000437166 265 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AL451074.3-201ENST00000437709 472 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 HMGB3P30-201ENST00000457863 606 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 SNORD109B-201ENST00000458961 67 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 SNORD109A-201ENST00000459128 67 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC092451.1-201ENST00000480211 153 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC135721.1-201ENST00000497954 479 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC078918.1-201ENST00000498515 228 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC006445.2-201ENST00000510061 472 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 RNA5SP337-201ENST00000517007 109 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 HMGN1P28-201ENST00000521340 364 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC055876.1-202ENST00000567053 138 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC006270.2-201ENST00000578523 652 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 AC007687.1-201ENST00000602704 304 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 XIAPP1-201ENST00000603162 600 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 MIR98-201ENST00000606724 119 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 MIR6130-201ENST00000619419 109 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 CR381653.2-201ENST00000624041 768 ntBASIC3.35□□□□□ -1.87
PDS5AQ29RF7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.35□□□□□ -1.87
PDS5AQ29RF7 TAB3P1-202ENST00000452645 1634 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 RNU6-223P-201ENST00000362830 107 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 RNY3P13-201ENST00000365542 102 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 SNORA20.2-201ENST00000383922 131 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 Y_RNA.554-201ENST00000384672 102 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 MTCO3P40-201ENST00000392516 676 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AL592148.1-201ENST00000413568 445 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AL451074.5-201ENST00000415894 435 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 MRPL50P2-201ENST00000416821 482 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 RPS15AP12-201ENST00000419498 388 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 VDAC1P3-201ENST00000434069 851 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC244505.4-201ENST00000434905 287 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 SSXP5-201ENST00000443473 287 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC003071.1-201ENST00000451219 789 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 RPL21P41-201ENST00000459863 264 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC003982.1-202ENST00000469928 248 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 RPL7P5-201ENST00000471472 736 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC007182.2-201ENST00000489251 402 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC023194.1-201ENST00000493084 308 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 RNA5SP385-201ENST00000515947 110 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 RNU6-798P-201ENST00000516912 103 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC022616.3-201ENST00000523940 148 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 DEFB108D-201ENST00000527787 222 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 RBM11P1-201ENST00000604951 799 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC092954.2-201ENST00000609103 430 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC017083.3-201ENST00000609955 700 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AL590282.1-201ENST00000610379 1136 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 AC090517.2-201ENST00000614966 680 ntBASIC3.34□□□□□ -1.87
PDS5AQ29RF7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PDS5AQ29RF7 GABPAP-201ENST00000419271 1356 ntBASIC3.34□□□□□ -1.88
PDS5AQ29RF7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDS5AQ29RF7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDS5AQ29RF7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PDS5AQ29RF7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
PDS5AQ29RF7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDS5AQ29RF7 RNY1P12-201ENST00000364251 105 ntBASIC3.33□□□□□ -1.88
PDS5AQ29RF7 RNU6-282P-201ENST00000365357 103 ntBASIC3.33□□□□□ -1.88
PDS5AQ29RF7 RNU6-629P-201ENST00000384061 103 ntBASIC3.33□□□□□ -1.88
PDS5AQ29RF7 MIR34A-201ENST00000385130 110 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms