Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
WNT3AP56704 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
WNT3AP56704 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
WNT3AP56704 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
WNT3AP56704 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
WNT3AP56704 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
WNT3AP56704 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
WNT3AP56704 ZNF285B-201ENST00000561698 1767 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
WNT3AP56704 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
WNT3AP56704 RNU6-562P-201ENST00000362731 107 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 SNORA33.2-201ENST00000365413 134 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
WNT3AP56704 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
WNT3AP56704 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.94□□□□□ -1.78
WNT3AP56704 RPL21P90-201ENST00000415692 466 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 RPL7P10-201ENST00000417407 739 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 AL590632.1-201ENST00000424289 371 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 AL451062.2-201ENST00000427515 271 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
WNT3AP56704 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.94□□□□□ -1.78
WNT3AP56704 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.94□□□□□ -1.78
WNT3AP56704 HSFY6P-201ENST00000445573 403 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.94□□□□□ -1.78
WNT3AP56704 RNU7-152P-201ENST00000458982 64 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 snoU13.24-201ENST00000458998 104 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 RPL21P41-201ENST00000459863 264 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 RPL37P6-201ENST00000460682 294 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 AC092451.1-201ENST00000480211 153 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 AC009901.1-201ENST00000506703 541 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.94□□□□□ -1.78
WNT3AP56704 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.94□□□□□ -1.78
WNT3AP56704 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.94□□□□□ -1.78
WNT3AP56704 RNU6-1069P-201ENST00000516612 133 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.94□□□□□ -1.78
WNT3AP56704 AC120057.2-201ENST00000571520 271 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.94□□□□□ -1.78
WNT3AP56704 ZYXP1-201ENST00000617638 118 ntBASIC3.94□□□□□ -1.78
WNT3AP56704 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.94□□□□□ -1.78
WNT3AP56704 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.94□□□□□ -1.78
WNT3AP56704 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
WNT3AP56704 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
WNT3AP56704 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.94□□□□□ -1.78
WNT3AP56704 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
WNT3AP56704 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
WNT3AP56704 UBE2L2-201ENST00000254302 429 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 Y_RNA.187-201ENST00000363918 113 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.93□□□□□ -1.78
WNT3AP56704 SNORA22B-201ENST00000383876 138 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 RNU6-1160P-201ENST00000384546 104 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 MIR514A1-201ENST00000385133 98 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 AL445189.1-201ENST00000405722 338 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 RPL31P12-201ENST00000422587 358 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 AL592045.1-201ENST00000429867 352 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.93□□□□□ -1.78
WNT3AP56704 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.93□□□□□ -1.78
WNT3AP56704 AL645939.1-201ENST00000453429 797 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.93□□□□□ -1.78
WNT3AP56704 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.93□□□□□ -1.78
WNT3AP56704 MTCYBP40-201ENST00000509390 1135 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 AC104136.1-201ENST00000512969 394 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.93□□□□□ -1.78
WNT3AP56704 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.93□□□□□ -1.78
WNT3AP56704 AC025423.5-201ENST00000550230 219 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.93□□□□□ -1.78
WNT3AP56704 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
WNT3AP56704 AP000942.4-201ENST00000604811 241 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 AC002044.1-201ENST00000606707 158 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 AL355802.3-201ENST00000607571 545 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 MIR6128-201ENST00000615528 109 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 MIR4727-201ENST00000622232 55 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 AL512643.1-201ENST00000635735 524 ntBASIC3.93□□□□□ -1.78
WNT3AP56704 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.93□□□□□ -1.78
WNT3AP56704 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
WNT3AP56704 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
WNT3AP56704 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.93□□□□□ -1.78
WNT3AP56704 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
WNT3AP56704 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
WNT3AP56704 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.92□□□□□ -1.78
WNT3AP56704 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
WNT3AP56704 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
WNT3AP56704 MTND5P19-201ENST00000424872 1794 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
WNT3AP56704 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
WNT3AP56704 Y_RNA.197-201ENST00000364004 102 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 RNU6-512P-201ENST00000364438 103 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 RNA5SP283-201ENST00000365604 119 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 Y_RNA.473-201ENST00000384333 102 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 RN7SKP177-201ENST00000410567 355 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 AL513331.1-201ENST00000411908 397 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 SNAP23P1-201ENST00000433229 246 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 AL356535.1-201ENST00000440335 398 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.92□□□□□ -1.78
WNT3AP56704 RPL23AP31-201ENST00000456160 467 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.92□□□□□ -1.78
WNT3AP56704 HMGB1P22-201ENST00000505315 124 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.92□□□□□ -1.78
WNT3AP56704 RNA5SP471-201ENST00000516971 106 ntBASIC3.92□□□□□ -1.78
WNT3AP56704 RNU6-1073P-201ENST00000517182 106 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms