Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.71□□□□□ -1.5
PTPN5P54829 AC000068.2-201ENST00000608816 460 ntBASIC5.71□□□□□ -1.5
PTPN5P54829 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
PTPN5P54829 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN5P54829 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN5P54829 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN5P54829 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.71□□□□□ -1.5
PTPN5P54829 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
PTPN5P54829 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN5P54829 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
PTPN5P54829 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN5P54829 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN5P54829 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN5P54829 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
PTPN5P54829 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
PTPN5P54829 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
PTPN5P54829 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
PTPN5P54829 AC144833.1-201ENST00000567953 4089 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN5P54829 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 RN7SKP113-201ENST00000363891 295 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 RNVU1-3-201ENST00000364313 161 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 RNU4-10P-201ENST00000364383 140 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 SNORD58C-201ENST00000365223 64 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 RNA5SP87-201ENST00000384155 118 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 Y_RNA.572-201ENST00000384757 98 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 MIR29B2-201ENST00000385055 81 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 MIR616-201ENST00000385293 97 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PTPN5P54829 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
PTPN5P54829 SNORA75.5-201ENST00000391291 81 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 HLFP1-201ENST00000402375 499 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 RPL31P2-201ENST00000413849 377 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 PPP1R11P2-201ENST00000423543 382 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.7□□□□□ -1.5
PTPN5P54829 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.7□□□□□ -1.5
PTPN5P54829 AC092798.1-201ENST00000458542 409 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 BTF3L4P4-201ENST00000506381 449 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.7□□□□□ -1.5
PTPN5P54829 MIR4284-201ENST00000578924 81 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 MIR4420-201ENST00000583944 77 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 AC012616.1-201ENST00000600294 197 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 AL357075.2-201ENST00000614906 189 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.7□□□□□ -1.5
PTPN5P54829 AL359955.1-201ENST00000455242 3275 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 CENPCP1-201ENST00000533085 2578 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 AP000756.2-201ENST00000624168 2567 ntBASIC5.7□□□□□ -1.5
PTPN5P54829 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PTPN5P54829 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN5P54829 AC007390.2-201ENST00000606229 3803 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTPN5P54829 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PTPN5P54829 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN5P54829 RNU6-766P-201ENST00000362478 107 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 SNORD14B-201ENST00000364533 90 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 MIR137-201ENST00000385223 102 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 MIR130A-201ENST00000385274 89 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 RNA5SP339-201ENST00000390987 122 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 BTF3L4P2-201ENST00000392798 346 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.69□□□□□ -1.5
PTPN5P54829 AC090774.1-201ENST00000435925 246 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN5P54829 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN5P54829 RPL7AP61-201ENST00000443410 636 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 AL353705.4-201ENST00000449661 238 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 AL121914.1-201ENST00000450188 156 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 AF186996.7-201ENST00000492781 209 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 GLUD1P3-202ENST00000508551 200 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.69□□□□□ -1.5
PTPN5P54829 RNU6ATAC17P-201ENST00000516074 71 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN5P54829 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN5P54829 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN5P54829 MIR5695-201ENST00000579717 85 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 AC209154.1-201ENST00000582156 337 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN5P54829 AL450472.3-201ENST00000615578 367 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 MIR6758-201ENST00000620653 63 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 AL121890.5-201ENST00000620848 304 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 AC012640.5-201ENST00000623897 319 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PTPN5P54829 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN5P54829 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN5P54829 AC093671.1-201ENST00000624981 2929 ntBASIC5.69□□□□□ -1.5
PTPN5P54829 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN5P54829 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN5P54829 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN5P54829 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms