Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 HMGB3P12-201ENST00000438745 556 ntBASIC3.5□□□□□ -1.85
PMS2P54278 RPL21P23-201ENST00000446654 460 ntBASIC3.5□□□□□ -1.85
PMS2P54278 DPPA3P1-201ENST00000448050 469 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.5□□□□□ -1.85
PMS2P54278 FDX1P2-201ENST00000450769 375 ntBASIC3.5□□□□□ -1.85
PMS2P54278 MTND3P10-201ENST00000450967 341 ntBASIC3.5□□□□□ -1.85
PMS2P54278 SSXP4-201ENST00000451349 245 ntBASIC3.5□□□□□ -1.85
PMS2P54278 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.5□□□□□ -1.85
PMS2P54278 RNU6-420P-201ENST00000458780 107 ntBASIC3.5□□□□□ -1.85
PMS2P54278 U3.44-201ENST00000458938 192 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AC091179.1-201ENST00000461606 579 ntBASIC3.5□□□□□ -1.85
PMS2P54278 HSPE1P6-201ENST00000479457 291 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AC012181.1-201ENST00000479895 423 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.5□□□□□ -1.85
PMS2P54278 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.5□□□□□ -1.85
PMS2P54278 RNU6-1281P-201ENST00000516223 105 ntBASIC3.5□□□□□ -1.85
PMS2P54278 SNORA70.16-201ENST00000516390 95 ntBASIC3.5□□□□□ -1.85
PMS2P54278 SNORA20.3-201ENST00000516880 132 ntBASIC3.5□□□□□ -1.85
PMS2P54278 MTND1P35-201ENST00000526739 508 ntBASIC3.5□□□□□ -1.85
PMS2P54278 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.5□□□□□ -1.85
PMS2P54278 AP000889.1-201ENST00000530968 660 ntBASIC3.5□□□□□ -1.85
PMS2P54278 OR5B10P-201ENST00000532869 642 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.5□□□□□ -1.85
PMS2P54278 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.5□□□□□ -1.85
PMS2P54278 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.5□□□□□ -1.85
PMS2P54278 HMGB1P6-201ENST00000569046 646 ntBASIC3.5□□□□□ -1.85
PMS2P54278 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.5□□□□□ -1.85
PMS2P54278 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.5□□□□□ -1.85
PMS2P54278 BNIP3P30-201ENST00000601184 574 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AL020991.1-201ENST00000612314 373 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
PMS2P54278 AL442067.2-201ENST00000614033 363 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AL603758.1-201ENST00000618654 241 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AC073476.4-201ENST00000628409 72 ntBASIC3.5□□□□□ -1.85
PMS2P54278 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PMS2P54278 AC090740.1-201ENST00000623193 2262 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
PMS2P54278 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.49□□□□□ -1.85
PMS2P54278 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PMS2P54278 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PMS2P54278 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PMS2P54278 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PMS2P54278 RNU6-278P-201ENST00000390945 109 ntBASIC3.49□□□□□ -1.85
PMS2P54278 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.49□□□□□ -1.85
PMS2P54278 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.49□□□□□ -1.85
PMS2P54278 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.49□□□□□ -1.85
PMS2P54278 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.49□□□□□ -1.85
PMS2P54278 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.49□□□□□ -1.85
PMS2P54278 RPS15AP9-201ENST00000439856 381 ntBASIC3.49□□□□□ -1.85
PMS2P54278 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.49□□□□□ -1.85
PMS2P54278 AL671855.1-201ENST00000446875 1203 ntBASIC3.49□□□□□ -1.85
PMS2P54278 AC016696.1-201ENST00000446949 318 ntBASIC3.49□□□□□ -1.85
PMS2P54278 AL162389.1-201ENST00000449233 177 ntBASIC3.49□□□□□ -1.85
PMS2P54278 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.49□□□□□ -1.85
PMS2P54278 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.49□□□□□ -1.85
PMS2P54278 AC117522.1-201ENST00000509821 380 ntBASIC3.49□□□□□ -1.85
PMS2P54278 SNORA40.12-201ENST00000516329 111 ntBASIC3.49□□□□□ -1.85
PMS2P54278 SCARNA24.1-201ENST00000516465 137 ntBASIC3.49□□□□□ -1.85
PMS2P54278 SCARNA13-201ENST00000516672 275 ntBASIC3.49□□□□□ -1.85
PMS2P54278 SNORA70.18-201ENST00000516696 98 ntBASIC3.49□□□□□ -1.85
PMS2P54278 RNU6-835P-201ENST00000516974 104 ntBASIC3.49□□□□□ -1.85
PMS2P54278 RNU6-410P-201ENST00000517006 107 ntBASIC3.49□□□□□ -1.85
PMS2P54278 FAM60DP-201ENST00000524174 632 ntBASIC3.49□□□□□ -1.85
PMS2P54278 AC011979.2-201ENST00000527568 352 ntBASIC3.49□□□□□ -1.85
PMS2P54278 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.49□□□□□ -1.85
PMS2P54278 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.49□□□□□ -1.85
PMS2P54278 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
PMS2P54278 AC006116.10-201ENST00000591836 581 ntBASIC3.49□□□□□ -1.85
PMS2P54278 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.49□□□□□ -1.85
PMS2P54278 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.49□□□□□ -1.85
PMS2P54278 AC119674.1-207ENST00000641355 633 ntBASIC3.49□□□□□ -1.85
PMS2P54278 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.49□□□□□ -1.85
PMS2P54278 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.48□□□□□ -1.85
PMS2P54278 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PMS2P54278 HSPE1P11-201ENST00000339579 310 ntBASIC3.48□□□□□ -1.85
PMS2P54278 RNU6-877P-201ENST00000383868 107 ntBASIC3.48□□□□□ -1.85
PMS2P54278 RNU6-1158P-201ENST00000391167 107 ntBASIC3.48□□□□□ -1.85
PMS2P54278 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PMS2P54278 AL109755.1-201ENST00000401791 649 ntBASIC3.48□□□□□ -1.85
PMS2P54278 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.48□□□□□ -1.85
PMS2P54278 AL591034.1-201ENST00000407447 340 ntBASIC3.48□□□□□ -1.85
PMS2P54278 RPL7L1P10-201ENST00000427790 463 ntBASIC3.48□□□□□ -1.85
PMS2P54278 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.48□□□□□ -1.85
PMS2P54278 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.48□□□□□ -1.85
PMS2P54278 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.48□□□□□ -1.85
PMS2P54278 AL121601.2-201ENST00000438019 707 ntBASIC3.48□□□□□ -1.85
PMS2P54278 RPL7P54-201ENST00000438336 674 ntBASIC3.48□□□□□ -1.85
PMS2P54278 AC009969.1-201ENST00000438726 172 ntBASIC3.48□□□□□ -1.85
PMS2P54278 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.48□□□□□ -1.85
PMS2P54278 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.48□□□□□ -1.85
PMS2P54278 AL356010.1-201ENST00000456364 102 ntBASIC3.48□□□□□ -1.85
PMS2P54278 AL049714.1-201ENST00000466686 347 ntBASIC3.48□□□□□ -1.85
PMS2P54278 RPL32P34-201ENST00000486380 400 ntBASIC3.48□□□□□ -1.85
PMS2P54278 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PMS2P54278 GMPSP1-201ENST00000514075 579 ntBASIC3.48□□□□□ -1.85
PMS2P54278 RNU6-840P-201ENST00000517275 65 ntBASIC3.48□□□□□ -1.85
PMS2P54278 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.48□□□□□ -1.85
PMS2P54278 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.48□□□□□ -1.85
PMS2P54278 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PMS2P54278 OR5BN1P-201ENST00000532955 829 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms