Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC096586.1-201ENST00000610267 561 ntBASIC1.52□□□□□ -2.17
NUP98P52948 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC106730.3-201ENST00000624568 641 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.52□□□□□ -2.17
NUP98P52948 AL049641.1-201ENST00000441055 1948 ntBASIC1.52□□□□□ -2.17
NUP98P52948 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.52□□□□□ -2.17
NUP98P52948 RNU6-1328P-201ENST00000410938 106 ntBASIC1.52□□□□□ -2.17
NUP98P52948 USP9YP19-201ENST00000412165 485 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 USP9YP13-201ENST00000417797 480 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.52□□□□□ -2.17
NUP98P52948 RPS3AP44-201ENST00000425466 790 ntBASIC1.52□□□□□ -2.17
NUP98P52948 RPL31P54-201ENST00000429803 370 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 UBE2FP3-201ENST00000436366 524 ntBASIC1.52□□□□□ -2.17
NUP98P52948 COX7A2P2-201ENST00000505291 250 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.52□□□□□ -2.17
NUP98P52948 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.52□□□□□ -2.17
NUP98P52948 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.52□□□□□ -2.17
NUP98P52948 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
NUP98P52948 AC109446.2-201ENST00000567872 497 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.52□□□□□ -2.17
NUP98P52948 SNORA4-201ENST00000584302 138 ntBASIC1.52□□□□□ -2.17
NUP98P52948 AC090772.4-201ENST00000623599 362 ntBASIC1.52□□□□□ -2.17
NUP98P52948 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NUP98P52948 ZNF736P10Y-201ENST00000403990 1110 ntBASIC1.51□□□□□ -2.17
NUP98P52948 HMGN1P14-201ENST00000412459 517 ntBASIC1.51□□□□□ -2.17
NUP98P52948 HMGB1P9-201ENST00000429856 646 ntBASIC1.51□□□□□ -2.17
NUP98P52948 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.51□□□□□ -2.17
NUP98P52948 AC114786.4-201ENST00000508771 728 ntBASIC1.51□□□□□ -2.17
NUP98P52948 AC008837.2-201ENST00000513076 418 ntBASIC1.51□□□□□ -2.17
NUP98P52948 AC114797.1-201ENST00000514003 728 ntBASIC1.51□□□□□ -2.17
NUP98P52948 RNA5SP480-201ENST00000516840 109 ntBASIC1.51□□□□□ -2.17
NUP98P52948 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.51□□□□□ -2.17
NUP98P52948 AC090888.1-201ENST00000561335 1141 ntBASIC1.51□□□□□ -2.17
NUP98P52948 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.51□□□□□ -2.17
NUP98P52948 MIR3122-201ENST00000577243 73 ntBASIC1.51□□□□□ -2.17
NUP98P52948 MTND4LP5-201ENST00000605152 292 ntBASIC1.51□□□□□ -2.17
NUP98P52948 AP001486.3-201ENST00000615334 372 ntBASIC1.51□□□□□ -2.17
NUP98P52948 AL031601.2-202ENST00000622650 282 ntBASIC1.51□□□□□ -2.17
NUP98P52948 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
NUP98P52948 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NUP98P52948 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NUP98P52948 RNU4-91P-201ENST00000364778 135 ntBASIC1.5□□□□□ -2.17
NUP98P52948 RNU6-217P-201ENST00000384164 104 ntBASIC1.5□□□□□ -2.17
NUP98P52948 RNU6-220P-201ENST00000390919 107 ntBASIC1.5□□□□□ -2.17
NUP98P52948 RNU6-882P-201ENST00000391025 103 ntBASIC1.5□□□□□ -2.17
NUP98P52948 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.5□□□□□ -2.17
NUP98P52948 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.5□□□□□ -2.17
NUP98P52948 AC097493.1-201ENST00000463958 372 ntBASIC1.5□□□□□ -2.17
NUP98P52948 CABYRP1-201ENST00000465493 1045 ntBASIC1.5□□□□□ -2.17
NUP98P52948 SCARNA11.3-201ENST00000517276 130 ntBASIC1.5□□□□□ -2.17
NUP98P52948 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP98P52948 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP98P52948 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.5□□□□□ -2.17
NUP98P52948 AGGF1P5-201ENST00000567900 919 ntBASIC1.5□□□□□ -2.17
NUP98P52948 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP98P52948 AC002487.1-201ENST00000604565 994 ntBASIC1.5□□□□□ -2.17
NUP98P52948 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP98P52948 AL592148.2-201ENST00000612210 372 ntBASIC1.5□□□□□ -2.17
NUP98P52948 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.5□□□□□ -2.17
NUP98P52948 MKKS-204ENST00000639674 192 ntBASIC1.5□□□□□ -2.17
NUP98P52948 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.5□□□□□ -2.17
NUP98P52948 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.5□□□□□ -2.17
NUP98P52948 RPL21P1-201ENST00000399532 476 ntBASIC1.5□□□□□ -2.17
NUP98P52948 RN7SKP158-201ENST00000410453 326 ntBASIC1.5□□□□□ -2.17
NUP98P52948 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP98P52948 AL592447.1-201ENST00000447592 540 ntBASIC1.5□□□□□ -2.17
NUP98P52948 RNA5SP233-201ENST00000459153 113 ntBASIC1.5□□□□□ -2.17
NUP98P52948 AC107626.1-201ENST00000471084 183 ntBASIC1.5□□□□□ -2.17
NUP98P52948 AC084024.2-201ENST00000503480 791 ntBASIC1.5□□□□□ -2.17
NUP98P52948 AC008526.1-201ENST00000509149 338 ntBASIC1.5□□□□□ -2.17
NUP98P52948 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP98P52948 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.5□□□□□ -2.17
NUP98P52948 MIR514B-201ENST00000516774 80 ntBASIC1.5□□□□□ -2.17
NUP98P52948 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.5□□□□□ -2.17
NUP98P52948 ARL2BPP5-201ENST00000523141 481 ntBASIC1.5□□□□□ -2.17
NUP98P52948 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP98P52948 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.5□□□□□ -2.17
NUP98P52948 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.5□□□□□ -2.17
NUP98P52948 HMGN2P15-201ENST00000585707 270 ntBASIC1.5□□□□□ -2.17
NUP98P52948 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.5□□□□□ -2.17
NUP98P52948 AL162373.1-201ENST00000620433 407 ntBASIC1.5□□□□□ -2.17
NUP98P52948 HMGB1P5-201ENST00000255320 642 ntBASIC1.49□□□□□ -2.17
NUP98P52948 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
NUP98P52948 TMSB4XP8-201ENST00000402089 135 ntBASIC1.49□□□□□ -2.17
NUP98P52948 RN7SKP51-201ENST00000410781 304 ntBASIC1.49□□□□□ -2.17
NUP98P52948 TMSB4XP6-201ENST00000415187 135 ntBASIC1.49□□□□□ -2.17
NUP98P52948 TMSB4XP1-201ENST00000424567 135 ntBASIC1.49□□□□□ -2.17
NUP98P52948 AC009238.1-201ENST00000442165 424 ntBASIC1.49□□□□□ -2.17
NUP98P52948 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NUP98P52948 AC009237.6-201ENST00000446969 424 ntBASIC1.49□□□□□ -2.17
NUP98P52948 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NUP98P52948 AC048346.1-201ENST00000510247 144 ntBASIC1.49□□□□□ -2.17
NUP98P52948 AC092436.3-201ENST00000511788 257 ntBASIC1.49□□□□□ -2.17
NUP98P52948 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.49□□□□□ -2.17
NUP98P52948 RNU6-416P-201ENST00000516265 103 ntBASIC1.49□□□□□ -2.17
NUP98P52948 SNORA31.25-201ENST00000517242 134 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms